Pseudomonas chlororaphis subsp. piscium: C4K32_5430
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Entry
C4K32_5430 CDS
T09060
Name
(GenBank) Sensory box/GGDEF domain/EAL domain protein
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_3
PAS_8
dCache_1
Motif
Other DBs
NCBI-ProteinID:
AZC72057
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Position
5970933..5974772
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AA seq
1279 aa
AA seq
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MSNATPPSSLRAPAPASGSPLRGTLKGVLATLVLLLLALLFWQLLDQLQQTRKDQRQHAI
DYNADLAEHISLNLALNAQIALNLLPIVEPPQNAEQQQLLLKKLQLSLPDLQSIALLDAK
GQLVSDSDADGQDAAWLTELTSRSRGQRYYYSNASDGALVQLLLHQPSGALKSYWVLRLT
PTFVQSLSPSPDQGFQPTWVIENRQDQKTLSRDDGSSTPVTSDEIANSVLVAPLGNSDWQ
LRGLFDERAVIEQLLPAFIAKCLLGLAFSLLPVIALLNMRRRQRQLHEGRRRYQDIFEGT
GVALCVLDISGLPAFLDKAQLHDSEQLKAWLEHNPQQRQLLLEELRVTEVNQVALRLLNV
DSCEQAWKLLIEGSPLNSSAIGNQLLETVINQHKQLELEIRLSDAQGHDQHLWLVLRLPE
DPADYRAVILSISDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSNHHL
GQTLGYNKTELHQMGEYFWEILLHPEDADLYHRLRQEQRHAGYLQLLQCHLRFRHRSGQW
RCFDIREQALARDKYDQVTRIIGVAKDITDQIEASESLRDSERRYRMLAESISDVIFSTD
SKMALNYVSPSVQSVLGYDAEWIFQNGWQSTIANPQQLTGIYALMERIGKALDKPEQLAQ
LRNQVQTQLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKDLRM
AATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSQVLDQLPNMLTVDEQQEAHLRYV
LKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFTDISERKASEQRI
HRLAYYDALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHAAGDR
MLKEMATRLLDCVDDDDTVARMGGDEFTLLLQPRTSREIALNRAIHVAEQILASLVKPFV
LEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALER
LELESDLRHALEQQEFILYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEEL
GLVVDVGDWVISEACRQLKAWHQAKVRVPKVSVNISARQFSDGQLGMRIATILKDTGLPP
ACLELELTESILMREVSEAMQILDGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDR
TFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRP
MPANSFEGQFSNDALFMFD
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaatgccactccgccctcttccctgcgcgcacctgcgcctgcgtccggctcgccc
ttgcgcggcaccctgaaaggcgtgctggcgaccctggtcctgctgctgctcgccctgctg
ttctggcaactgctcgaccaactgcaacagacccgcaaagaccagcgtcaacacgcgatc
gactacaacgccgacctggccgagcacatcagcctcaatctggcgctcaatgcgcagatc
gccctcaacctgctgccgatcgtcgagccgccacagaatgccgaacagcagcaactgctg
ctgaaaaagctgcaactgtccctgcccgacctgcaaagcatcgcgctgctggatgccaag
ggccagctcgtcagcgacagcgacgccgacggccaggacgccgcgtggctcaccgagctg
accagccgcagccgcggccagcgctactactacagcaacgccagcgacggcgcgctggta
caactgctgctgcaccagcccagcggcgcactcaagagctactgggtgctgcgcctgaca
ccgactttcgttcagtccctgagccccagccccgaccagggcttccaaccgacctgggtt
attgaaaaccgccaggatcagaaaaccctcagtcgcgacgacggcagcagcaccccggtg
accagcgacgaaatagccaacagtgtgctggtcgcgccactgggtaacagcgattggcaa
ttgcgcggcctgttcgacgaacgcgcggtgatcgagcaactgctaccagcgtttatcgcc
aaatgcctgctagggctcgcgttctccctactgccggtgattgcgctgctgaacatgcgc
cgccgccagcgccagctgcacgaagggcgtcggcgctaccaggacattttcgaaggcacc
ggggtcgccctctgcgtcctggatatttccgggctgccggcgtttctcgacaaggcccag
ctgcacgacagcgaacaactcaaggcctggctggagcacaacccgcagcagcggcagctg
ctgcttgaagaactgcgcgtcaccgaagtcaatcaggtggccttgcggctgctcaacgtc
gactcctgcgaacaggcctggaagctgctgatcgaaggcagcccgctcaacagcagcgcc
atcggcaaccagctgctggagaccgtgatcaaccagcacaaacagctggagctggaaatc
cgtctcagcgacgcccagggccacgaccagcacctgtggctggtactgcgcctgccggaa
gatcccgccgactatcgggcggtgatcctcagcatcagcgacatcactagccgcaagctc
atcgaactgtcgctgctggagcgcgaaggcttctggtcggacgtggtgcgcaccgtgccg
gaccacctttatgtgcaggacgtcatcagccagcggatgatcttcagcaaccaccacctg
gggcagaccctcggctacaacaagaccgaactgcaccagatgggcgagtatttctgggaa
atcctcctgcatccggaggacgccgacctctaccaccggttgcgccaggaacaacggcat
gccggctacctgcaattgctgcagtgccatttgcgctttcgccaccgcagtggccaatgg
cgctgtttcgacatccgtgaacaggccctggcgcgggacaagtacgaccaggtcacgcgc
atcatcggcgtggccaaggacatcaccgaccagatcgaggccagcgaatccctgcgtgac
agcgaacgccgctaccgcatgctcgccgaaagcatcagcgacgtgattttctccaccgac
agtaagatggccctcaactatgtcagcccctcggtgcagtcggtgctgggctatgacgcc
gaatggatcttccagaacggctggcaatcgaccatcgccaacccgcaacagctgaccggc
atctatgccctgatggagcggatcggcaaggccctggacaagcccgagcaactggcgcaa
ttgcgcaaccaggtacagacccagttgttcctgttcgactgcctgcgggccgacgggcgc
aagattccgatcgagctgcgcctggtgctggtgtgggacgaacacggcgccttcgaaggc
gtgctcggggtcggccgcgatatcagccagcagcgccgcgcggaaaaagacctgcgcatg
gcggccacggtattcgagcattcgacctcggcgatcctgatcaccgacccggcgggctac
atcgtccaggccaacgaggcgttcagccgggtcagcggctacgcggtatcccaggtgctc
gaccagttgccgaacatgctcaccgtcgacgaacagcaggaagcccacctgcgttatgtg
ctcaagcagttgcaccagcacagcacctgggaaggcgaggtctggctcaagcgccgcaac
ggcgagcactatccggcctgggtcggcatcaccgcggtactcgatgacgaaggcgacctg
gccagctacgtgtgcttcttcaccgacatcagcgaacgcaaggccagcgagcagcgcatt
caccgcctggcctactacgacgccctgacccacctgcccaaccgcacgctgttccaggac
cgcctgcataccgccctgcaatcggcggagcggcagaagtcctgggtggtgctgatgttc
ctcgacctggaccgcttcaagccgatcaacgactccctgggccacgccgcgggcgaccgc
atgctcaaggaaatggccacccgcctgctcgattgcgtcgacgatgacgacaccgtggcg
cgcatgggcggcgatgagttcaccttgctcctgcaaccgcggaccagccgcgagattgcc
ctgaaccgcgcgatccacgtcgccgaacagattctcgccagcctggtgaagccgttcgtg
ctcgaaggccgggagttcttcgtcaccgccagtatcggtatcgccctcagcccgcaggac
ggcaacgagctgagccagctgatgaaaaacgccgacaccgcgatgtaccacgccaaggaa
cgcggcaagaacaacttccagttctaccaggccgatatgaacgccagtgccctggagcgc
ctggagctggaaagcgacctgcgccacgccctggaacagcaggaattcatcctgtactac
cagccgcagttcagcggcgacggcaagcgcctgaccggcgccgaagccctgctgcgctgg
cgccatccgcggcgtgggctggtaccgccgggggacttcatcccggtgctcgaagaactg
gggctggtggtggatgtcggtgactgggtgatcagcgaagcctgtcgccagctcaaggcc
tggcaccaggccaaggtccgggtgccgaaggtctcggtgaacatctcggcccgccagttc
tccgacggccagctgggtatgcggatcgccaccatcctcaaggacaccggcctgccgccg
gcctgcctggagctggaactgaccgaaagtatcctgatgcgcgaagtcagcgaagcaatg
cagatcctcgacggcctgaagaacctcggcctgagcatcgcagtcgacgacttcggcacc
ggctattcatcgctgaactacctcaagcagttccccatcgacgtgttgaagatcgaccgc
accttcgtcgacggcctgccgtccggcgagcaggacgcgcagatcgcccgcgccatcatc
gccatggcccacagcctgaacctcgcggtgatcgccgaaggcgtggaaacccatgagcag
ctggacttcctgcgcgagcacggctgtgacgaagtccagggctatctgttcggccggccg
atgccggccaacagcttcgaagggcaattcagcaacgatgcgctgttcatgttcgattga
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