Pseudomonas chlororaphis subsp. piscium: C4K32_5441
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Entry
C4K32_5441 CDS
T09060
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchp03400
]
C4K32_5441
DNA repair and recombination proteins [BR:
pchp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C4K32_5441
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
RecA
GvpD_P-loop
SLFN-g3_helicase
AAA
AAA_24
DUF7125
nSTAND3
AAA_14
Rad51
NTPase_1
MCM
ABC_tran
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AZC72068
LinkDB
All DBs
Position
complement(5984784..5986151)
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLTETMVESGGAAAPSGRTGWAGQQAQIK
TLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATRMA
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARLEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEPPQGLRIIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggcgcaacctttcccaagtgg
gccggccagtgcggtgaatgcggagcctggaacaccctgaccgaaaccatggtggaaagc
ggcggcgccgcggcccctagcggtcgcaccggctgggccggccagcaggcgcagatcaag
accctggccgaggtcagcgtcgaggagataccgcgcttttccacggcttccggcgaactg
gaccgggtgctcggcgggggcctggtcgacggttcggtggtgctgatcggcggcgacccg
gggatcggcaagtcgaccattctgctgcagaccctgtgcaacatcgccacccgcatggcg
gcgctctacgtcaccggcgaagaatcgcagcaacaggtggcgatgcgcgcccggcgcctg
ggcctgccccaggaccaactgcgggtgatgaccgaaacctgtatcgaaaccatcatcgcc
acggcccggctggagaagcccaaggtcatggtgatcgactcgatccagaccattttcacc
gagcaactgcaatcggcccccggcggtgtttcccaggtgcgcgaaagcgcggcgctgttg
gtgcgttatgccaagcagagcggcacggcgatcttcctggtgggccacgtgaccaaggag
ggcgcgctggccgggccgcgggtcctcgagcacatggtcgacaccgtgctgtatttcgaa
ggtgagtccgatggccgcctgcgcttgctgcgggcggtgaagaaccgcttcggcgcggtc
aacgagctgggcgtgttcggcatgaccgaccgcggcctgaaagaggtttccaacccttcg
gcgatctttctcacccgtgcccaggaagaagttccgggcagcgtggtcatggccacctgg
gaaggcacccggccgatgctggtggaagtccaggcgctggtggatgacagccacctggcc
aatccgcggcgggtcaccctgggcctggaccagaaccgcctggcgatgctgctggcggtg
ctgcatcgccatggcggcatcccgacccacgatcaggacgtgttcctcaacgtggtcggc
ggggtcaaggtgctggaaaccgcgtccgacctggcgctgatggcggcggtgatgtccagc
ctgcgcaaccggcccttgccccacgacttgctggtgtttggcgaagtcggcctgtccggc
gaagtgcgcccggtgccgagcggccaggagcgcctcaaggaagcggccaaacatggtttc
aaacgggccatcgtgcccaagggcaatgccccgaaagagccgccacagggcctgcggatc
attgcggtaacgcgtctggagcaggcgctggatgcgctgttcgaataa
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