Pseudomonas chlororaphis subsp. piscium: C4K32_5458
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Entry
C4K32_5458 CDS
T09060
Name
(GenBank) Type I secretion system ATPase, ATP-binding component HasD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4K32_5458
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchp02000
]
C4K32_5458
02044 Secretion system [BR:
pchp02044
]
C4K32_5458
Transporters [BR:
pchp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
C4K32_5458
Secretion system [BR:
pchp02044
]
Type I secretion system
Multiple protein transporter
C4K32_5458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA
AAA_25
AAA_16
NACHT
STAS
AAA_22
AAA_33
RsgA_GTPase
Rad17
AAA_18
PRK
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AZC72085
LinkDB
All DBs
Position
complement(6003195..6004976)
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AA seq
593 aa
AA seq
DB search
MSRPNPLAGSETLAALAAYKSGFFNIGLFSAVINLLMLAPALYMLQVYDRVLASGNQMTL
LMLTLMIVGLFGLMGALEWVRSQVVIRLGTQMDMRLNQRVYDAAFEAQLKGSPQAAGQAL
NDLTALRQFATGNALFAFFDAPWFPVYLLVIFLFHPWLGLLALGGALLLVALAWINQHIC
QAPLAEASQLSIGTSQQATANLRNADAIEAMGMLAALRERWFGGHQAFLAQQNLASEKTA
LISAWSKGVRLALQSLVLGLGALLAVQGEITPGMMIAGSILMGRVLSPIDQLIAVWKQWS
SARLAYARLSEMLQANPPRPARMSLPTPKGELSVEQLSACAPGSRRPALANLGFTLPAGQ
VLGVIGPSGCGKSTLARLLVGAWTPLAGKVRLDGAELGQWDRQQLGPHIGYLPQDIQLFA
GSIAENIARFGEVNADQVLAAAQMAGVHQLILQLPQGYDTRLGEGGAGLSGGQKQRIALA
RALYGLPALIVLDEPNANLDEAGEQALLQAIAQLKQQRRTLVLITHKPNVLSLTDQLMIL
REGQLQAFGPTTRVLEGMHKPKAAPVAPAITPAASMNVSYRLGVAATGEGKKA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggccgaacccacttgccggttccgagacgctggcggccctggccgcctataaa
agcggcttcttcaacatcggcctgttctcggcggtgatcaacctgctgatgctggcgccc
gcgctgtacatgctgcaggtgtacgaccgggtgctggcgtccggcaaccagatgaccctg
ttgatgctgacgctgatgatcgtcggcctgttcggcctgatgggcgccctggagtgggtg
cgcagccaagtggtgatccgcctgggcacgcagatggacatgcgcctgaaccagcgggtc
tacgatgcggccttcgaggcccagctcaagggcagcccgcaagccgccggccaggccctg
aatgacctgacggcgctgcgccagttcgccaccggcaatgcgctgttcgcgtttttcgat
gcgccgtggtttccggtctacctgctggtgatcttcctgttccatccctggctcggcctg
ttggccctgggcggcgcgctgctgttggtggccctggcctggatcaaccagcacatctgc
caggcgccgctggccgaggccagccagctgtccatcggcaccagccagcaggccacggcc
aacctgcgcaatgccgatgccattgaagccatgggcatgctcgccgcgctgcgcgagcgt
tggttcggcgggcaccaggcgttcctggcccagcagaacctggccagtgaaaagaccgcg
ctgatcagcgcctggtccaagggcgtgcgcctggccctgcaatccttggtgctgggcctc
ggcgcgctgctggcggtgcagggggaaatcaccccggggatgatgatcgccggctcgatc
ctgatgggccgggtgctcagccccatcgaccagctgatcgccgtgtggaaacagtggagc
tcggcgcgcctggcctatgcgcggttgtcagagatgctgcaggccaatccgccacgcccg
gcgcgcatgagcctgcccacgcccaagggcgagttgagcgtcgagcagttgagcgcctgc
gccccgggcagtcgccggccggccttggccaacctgggtttcaccctgccggccgggcag
gtgctgggggttatcggcccctccggttgtggcaagtcgaccctggcgcggctgttggtg
ggggcctggacgccgctggcgggcaaggtccgcctcgacggcgcggaactgggccagtgg
gaccgccagcaactcggcccgcacatcggttacctgccccaggatatccagctattcgcc
ggcagcatcgccgagaacatcgcgcgcttcggcgaggtgaacgccgaccaggtcctggcg
gcagcgcagatggccggggtgcatcaactgatcctgcaattgccgcaaggctatgacacc
cgcctgggggagggcggggccggactgtccggggggcagaagcagcgcatcgccctggcc
cgcgcgctgtatggcctgccagcgctgatcgtgctcgacgaacccaacgccaacctcgat
gaggccggcgagcaggcactgttgcaggcgattgcccagctcaagcagcagcgccgcacc
ctggtgctgatcacccacaagcccaatgtgctgagcctgaccgaccagctgatgatcctg
cgcgagggccaactgcaggctttcgggccgacgacgcgggtcctggaaggcatgcacaag
cccaaggcggctccagtggccccggcgatcaccccggcggccagcatgaatgtcagttat
cgcctgggcgtggccgccaccggcgaaggaaaaaaagcatga
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