Pseudomonas chlororaphis subsp. piscium: C4K32_5476
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Entry
C4K32_5476 CDS
T09060
Name
(GenBank) Protocatechuate 3,4-dioxygenase beta chain
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp00362
Benzoate degradation
pchp01100
Metabolic pathways
pchp01120
Microbial metabolism in diverse environments
pchp01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C4K32_5476
00624 Polycyclic aromatic hydrocarbon degradation
C4K32_5476
Enzymes [BR:
pchp01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
C4K32_5476
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Ig_DR_A0283-like
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AZC72103
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Position
complement(6026062..6026781)
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AA seq
239 aa
AA seq
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MSDADSSRFVIRDRNWHPKALTPDYKTSVARSPRQALVSIPQSLSETSGPDFSHLKTGRF
DNDLLLNFNNGGLPVGERIIVAGRVCDQYGQPIPHTLVEMWQANAGGRYRHKNDRYLAPL
DPNFGGVGRALTDRDGYYSFRTIKPGPYPWRNGPNDWRPAHIHFSISGPSIATRLITQLY
FEGDPLIPLCPIVKSIANPDAVQSLIARLDMSSANPMDCLAYRFDIVLRGQRKTHFENC
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcagacagcagtcgtttcgttatccgtgaccgtaattggcatcccaaggcc
ctgacccccgactacaagacctccgtggcccgttcgccacgccaggcgctggtgagcatc
ccgcaatcgctgagcgagaccagcggccccgatttctcccatctgaagaccgggcgtttc
gataacgacctgctgctcaacttcaacaacggcggcttgccggtgggcgagcggatcatc
gttgccggccgggtctgcgatcagtacggccagccgattccccacaccctggtggagatg
tggcaagccaacgccggtggtcgctaccggcacaagaacgaccgctacctggcgcccctg
gatccgaacttcggcggcgtcggccgggccctgaccgaccgtgacggctactacagcttc
cgcaccatcaagcccggtccctacccatggcgcaacggcccgaacgactggcgcccggcg
catatccatttctccatcagcgggccctcgatcgccacgcggttgatcacccagctgtat
ttcgagggcgacccgctgattccgctgtgcccgatcgtcaagtcgatcgccaacccggac
gcggtgcagagcctgatcgcgcgcctggacatgagcagcgccaacccgatggactgcctg
gcctatcgcttcgacatcgtgttgcgcggccagcgcaaaacccacttcgagaattgctga
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