Pseudomonas chlororaphis subsp. piscium: C4K32_5519
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Entry
C4K32_5519 CDS
T09060
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp03030
DNA replication
pchp03430
Mismatch repair
pchp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4K32_5519
03430 Mismatch repair
C4K32_5519
03440 Homologous recombination
C4K32_5519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchp03032
]
C4K32_5519
03400 DNA repair and recombination proteins [BR:
pchp03400
]
C4K32_5519
Enzymes [BR:
pchp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4K32_5519
DNA replication proteins [BR:
pchp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C4K32_5519
DNA repair and recombination proteins [BR:
pchp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C4K32_5519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AZC72146
LinkDB
All DBs
Position
6070529..6071566
Genome browser
AA seq
345 aa
AA seq
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MKLAPAQLGKHLQGTLAPVYVISGDDPLLCQEAADAIRSAARQQGFDERQVFSADANFDW
GTLLQAGASMSLFAERRLLELRLPSGKPGDKGAAAFIEYCSRPAEDTLLLISLPKLDGSA
QKTKWGKALIDGEQTQFIQIWPVDASQLPQWIRQRLSQAGLSASQDAVELIAARVEGNLL
AAAQEIEKLKLMAEGGQITVETVQAAVADSARFDVFGLVDAILNGEAAHALRMLEGLRGE
GVEPPVILWALSRELRALANMSLQYSQGTPLDKVFSQARPPVWDKRKPLMSKALQRYSAP
RWAQLLLDAQRIDAQIKGQAAGSPWSSLSRLSLLMAGQRLPLPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgctcaactcggcaaacacctgcaaggcacgctcgcaccggtctat
gtcatcagtggcgatgacccgttgctgtgccaggaggccgccgatgccattcgcagcgcc
gcccgccagcagggcttcgacgaacgccaggtcttcagcgccgacgccaatttcgattgg
ggaacgctgctgcaagccggcgcgagcatgtcgctgttcgccgaaagacgcctgctggaa
ctgcgcctgccttcgggcaagcccggtgacaaaggcgccgcggccttcatcgaatactgc
tcacggccggccgaagacaccctgctgctgatcagcctgcccaagctcgatggcagcgcg
caaaagaccaaatggggcaaggccctgatcgatggcgagcagacccagttcatccagatc
tggccggtggatgccagccagttgccgcagtggattcgccaacgcctgtcccaggctggg
ctttccgccagccaggacgccgtggaactcatcgcggcccgggtagaaggcaacctgctg
gccgccgcccaggaaatcgaaaagctcaagctgatggccgaaggcggccagatcacggtg
gaaaccgtgcaagcggcagtcgccgacagtgcgcgcttcgacgttttcggactggtggat
gccatcctcaatggcgaggccgcccatgccctgcgcatgctcgaaggcctgcgcggtgaa
ggcgtcgagcctccagtgattctctgggcactgtcccgggaactgcgggcgctggccaat
atgtcgctgcagtacagccagggcactccgctggacaaggtgttcagccaggcccgtccg
cccgtctgggacaaacgcaagccgctgatgagcaaggccctgcagcgctattcggcgccg
cgctgggcgcaactgctgctcgatgcccagcgtatcgatgcgcagatcaaggggcaggcc
gccggctcgccctggagcagcctgagccgcctgtcgctgctgatggccggacaacgcctg
cctctccccgccgaataa
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