Pseudomonas chlororaphis subsp. piscium: C4K32_5573
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Entry
C4K32_5573 CDS
T09060
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C4K32_5573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchp03400
]
C4K32_5573
Enzymes [BR:
pchp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
C4K32_5573
DNA repair and recombination proteins [BR:
pchp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C4K32_5573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
AZC72200
LinkDB
All DBs
Position
6119803..6120045
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AA seq
80 aa
AA seq
DB search
MARKKAALDFEQSLADLQTLVERLENGELSLEDSLTAFEQGIGLTRDCQAALAQAEQKVQ
ILLERDGELAEEPFDAEQPE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaaagctgccttagatttcgaacaatccctcgccgacctgcaaacgctg
gtcgagcgtctggagaacggcgagctgtcgctggaagactcgttgactgccttcgagcaa
ggcatcggcctgacccgcgattgccaggcggcgctggcccaggccgagcagaaggtgcag
atcctgctggagcgcgatggcgaactggccgaagaacccttcgacgcggaacagccagaa
tga
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