Pseudomonas chlororaphis subsp. piscium: C4K32_5690
Help
Entry
C4K32_5690 CDS
T09060
Name
(GenBank) Spermidine/putrescine import ABC transporter permease protein PotB
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4K32_5690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchp02000
]
C4K32_5690
Transporters [BR:
pchp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
C4K32_5690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Orai-1
Motif
Other DBs
NCBI-ProteinID:
AZC72308
LinkDB
All DBs
Position
complement(6224744..6225991)
Genome browser
AA seq
415 aa
AA seq
DB search
MAISVPLNEVTSPSLKQRLARAERVNRWKAQALIAPLVLFLLLVFLVPIAALLYKSVGNP
EVVEGMPRTVVAVAGWDGRGLPAEPVYKALSEDLAEARKQQTLGDLSKRLNMELAGYRSL
LTKTARALPFKEEPASYKEALEAIDERWGDPAYWQAVRRNTSSLTPFYLLAAVDHRIDDL
GEIAPATPDQAIYLDIFARTFWMGLVITGICLVLAYPLAYLLANLPARQSNLLMILVLLP
FWTSILVRVAAWIVLLQSGGLINSALMAMGVIDKPLELVFNRTGVYISMVHILLPFMILP
IYSVMKGISPTYMRAAISLGCHPFASFWRVYFPQTYAGVGAGCLLVFILAIGYYITPALL
GSPNDQMVSYFVAFYTNTSINWGMATALGGLLLLATIVLYLIYSWLVGASRLRLS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggccattagcgttcccctgaacgaggtcaccagccccagcctcaagcagcgcctggcg
cgtgccgagcgggtcaaccgctggaaggcacaagccttgatagcgcctctggtgctgttc
ctgctgctggtgtttctcgtgcctatcgcagcgctgctgtacaagagcgtcggcaacccg
gaagtggtcgaaggcatgccgcgcaccgtggtcgccgtggccggttgggacggacgcggc
ctgccggccgagccggtgtacaaggcgctgagcgaagacctggccgaagcgcgcaagcag
caaaccctgggcgacctgtccaagcgactgaacatggagttggccggctatcgcagcctg
ctgaccaaaaccgctcgtgccctgccgttcaaggaggagccggcttcctataaggaagcg
ctggaagccatcgacgagcgctggggcgacccggcctactggcaggcggtacgccgtaat
accagcagcctgaccccgttctacctgctggccgccgtcgaccatcggatcgacgacctg
ggggagatcgccccggcgacccctgaccaggccatctacctggatatcttcgcccggacc
ttctggatgggcctggtgattaccggcatctgcctggtgctggcttacccgctggcgtac
ctgctggccaacctgccggcgcgccagagcaacctgctgatgattctggtgctgctgccg
ttctggacttcgatcctggtgcgtgtggcggcgtggatcgtgctgctgcaatcgggcggc
ctgatcaacagtgcgctgatggccatgggcgtgatcgacaagccgctggagctggtgttc
aaccgcaccggggtctacatctccatggtgcacatcctgctgccgttcatgatcctgccg
atctacagcgtgatgaaaggcatctcgccgacctatatgcgcgcggcgatttccctcggc
tgccacccgttcgccagtttctggcgggtgtatttcccacagacctatgccggcgtcggc
gccggttgcctgttggtattcatcctcgccatcggctactacatcaccccggcgctgctg
ggcagcccgaacgaccagatggtcagctacttcgtcgccttctacaccaacaccagcatc
aactggggcatggcgaccgcgctgggcggcctgctgctgttggcgaccatcgtgctgtat
ctgatctacagctggctggtgggcgccagtcgcctgcgcctgagctaa
DBGET
integrated database retrieval system
