KEGG   Pseudomonas chlororaphis subsp. piscium: C4K32_6083
Entry
C4K32_6083        CDS       T09060                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pchp  Pseudomonas chlororaphis subsp. piscium
Pathway
pchp00300  Lysine biosynthesis
pchp00470  D-Amino acid metabolism
pchp01100  Metabolic pathways
pchp01110  Biosynthesis of secondary metabolites
pchp01120  Microbial metabolism in diverse environments
pchp01230  Biosynthesis of amino acids
Module
pchp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pchp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    C4K32_6083
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    C4K32_6083
Enzymes [BR:pchp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     C4K32_6083
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AZC72700
LinkDB
Position
6644590..6645837
AA seq 415 aa
MDAFNYRDGQLFAEGVALSAIAERFGTPTYVYSRAHIEAQYHAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGAADKIVFSGVGKTRDDMRRALEVGVH
CFNVESSDELERLQQVAAELKVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVVGVDCHIGSQLTTLAPFIDALDRLLDLVDRLGECGIYLRHIDLGGGL
GVRYRDEEPPLAADYVKAVRERLDGRDLELVFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVSAVRPRDGQARTYDIVGPICETGDFLAKERQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGEQAVEVRRRETVAELFAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgcttttaactaccgcgacgggcagctgttcgcggaaggtgtagcgttgtccgcc
attgccgagcgctttggcacgccgacctacgtctattcccgagcgcatatcgaagcgcag
taccacgcgtacgccgatgccctcgccggcatgccgcacctggtctgcttcgcggtaaag
gccaactccaacctgggtgtactgaatgtactggcgcgtctgggcgccggtttcgacatc
gtctcccgcggcgagctggaacgcgtcctggcagctggcggcgcggccgacaagatcgtt
ttctccggtgttggcaagacccgtgacgacatgcgtcgcgccctggaagtcggtgtgcac
tgcttcaacgtcgagtccagcgacgagctggagcgcctgcaacaagtcgccgccgaactg
aaggttcgcgcgccggtctcgctgcgggtcaacccggatgtcgacgcgggcacccacccg
tacatttccaccggcctgaaggaaaacaagttcggtatcgccatcgccgatgccgaagac
gtgtacatccgcgcggcacagctgccgaacctggaagtggtcggcgtcgactgccatatc
ggctcgcaactgaccaccctggcccccttcatcgatgcccttgaccgtctgctggacctg
gtcgaccgcctgggcgagtgcggcatctacctgcgccacatcgacctcggtggtggcctg
ggcgtgcgttaccgcgatgaagagccgccgctggccgccgactacgtcaaggccgtgcgc
gaacgcctcgacggccgcgacctggaactggtcttcgaacccggccgtttcatcgtcgcc
aacgccggggtactgctgacccgggtcgagtacctcaagcacaccgaacacaaggacttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccagccctgtaccaggcctggatg
gacgtcagcgccgtacgcccgcgcgatggccaggcacgtacctacgacatcgtcggcccg
atctgcgaaaccggcgacttcctggccaaggaacgtcagctggcgctggaagaaggcgac
ctgctggccgtgcattcggccggtgcctacggtttcgtcatgagctccaactacaacacc
cgcggtcgcgctgctgaagtgctggtcgatggtgaacaggctgttgaagtacgtcgccgc
gagacggtagccgagttgtttgctggcgaaagcctgctgccggagtag

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