Pseudomonas chlororaphis subsp. piscium: C4K32_6083
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Entry
C4K32_6083 CDS
T09060
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Pathway
pchp00300
Lysine biosynthesis
pchp00470
D-Amino acid metabolism
pchp01100
Metabolic pathways
pchp01110
Biosynthesis of secondary metabolites
pchp01120
Microbial metabolism in diverse environments
pchp01230
Biosynthesis of amino acids
Module
pchp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4K32_6083
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C4K32_6083
Enzymes [BR:
pchp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C4K32_6083
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AZC72700
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Position
6644590..6645837
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AA seq
415 aa
AA seq
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MDAFNYRDGQLFAEGVALSAIAERFGTPTYVYSRAHIEAQYHAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGAADKIVFSGVGKTRDDMRRALEVGVH
CFNVESSDELERLQQVAAELKVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVVGVDCHIGSQLTTLAPFIDALDRLLDLVDRLGECGIYLRHIDLGGGL
GVRYRDEEPPLAADYVKAVRERLDGRDLELVFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVSAVRPRDGQARTYDIVGPICETGDFLAKERQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGEQAVEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgcgacgggcagctgttcgcggaaggtgtagcgttgtccgcc
attgccgagcgctttggcacgccgacctacgtctattcccgagcgcatatcgaagcgcag
taccacgcgtacgccgatgccctcgccggcatgccgcacctggtctgcttcgcggtaaag
gccaactccaacctgggtgtactgaatgtactggcgcgtctgggcgccggtttcgacatc
gtctcccgcggcgagctggaacgcgtcctggcagctggcggcgcggccgacaagatcgtt
ttctccggtgttggcaagacccgtgacgacatgcgtcgcgccctggaagtcggtgtgcac
tgcttcaacgtcgagtccagcgacgagctggagcgcctgcaacaagtcgccgccgaactg
aaggttcgcgcgccggtctcgctgcgggtcaacccggatgtcgacgcgggcacccacccg
tacatttccaccggcctgaaggaaaacaagttcggtatcgccatcgccgatgccgaagac
gtgtacatccgcgcggcacagctgccgaacctggaagtggtcggcgtcgactgccatatc
ggctcgcaactgaccaccctggcccccttcatcgatgcccttgaccgtctgctggacctg
gtcgaccgcctgggcgagtgcggcatctacctgcgccacatcgacctcggtggtggcctg
ggcgtgcgttaccgcgatgaagagccgccgctggccgccgactacgtcaaggccgtgcgc
gaacgcctcgacggccgcgacctggaactggtcttcgaacccggccgtttcatcgtcgcc
aacgccggggtactgctgacccgggtcgagtacctcaagcacaccgaacacaaggacttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccagccctgtaccaggcctggatg
gacgtcagcgccgtacgcccgcgcgatggccaggcacgtacctacgacatcgtcggcccg
atctgcgaaaccggcgacttcctggccaaggaacgtcagctggcgctggaagaaggcgac
ctgctggccgtgcattcggccggtgcctacggtttcgtcatgagctccaactacaacacc
cgcggtcgcgctgctgaagtgctggtcgatggtgaacaggctgttgaagtacgtcgccgc
gagacggtagccgagttgtttgctggcgaaagcctgctgccggagtag
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