Pseudomonas chlororaphis subsp. piscium: C4K32_6086
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Entry
C4K32_6086 CDS
T09060
Name
(GenBank) Site-specific tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pchp03036
]
C4K32_6086
Chromosome and associated proteins [BR:
pchp03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
C4K32_6086
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Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3549
HTH_38
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
AZC72703
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All DBs
Position
6647414..6648310
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AA seq
298 aa
AA seq
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MERQLDAYCEHLRSERQVSPHTLQAYRRDLEKVLAFCAKQQVSSWSDLDIQGLRSMIARL
HQQGQSSRSLARLLSAVRGLYHYLNREGLCNHDPANGLAPPKGERRLPKTLDTDRALQLL
DGAVEDDFLAHRDQAILELFYSSGLRLSELTSLDLEQLDLADGLVQVHGKGSKTRVLPVG
KKAREALQLWLPLRALSNPPDDAVFVSQQGRRLGPRAIQLRVKAAGERELGQNLHPHMLR
HSFASHMLESSQDLRAVQELLGHSDIKTTQIYTHLDFQHLAAVYDSAHPRAKRNKGGE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggaacgacaattggacgcctactgcgagcacctgcgcagtgagcgccaagtgtcgccc
catacgttgcaggcctaccgccgcgatctggaaaaagtgctggccttctgcgccaagcag
caggtttccagctggtccgacctggacatccagggcctgcgcagcatgattgcgcgcctg
caccagcagggccaatcgtcccgcagcctggcgcgcctgctctccgccgtacgcggcctg
tatcactatctgaaccgcgaaggcctgtgcaatcacgacccggccaacgggctggcgccg
cccaagggcgagcgtcgcctgcccaagaccctggacaccgatcgtgcgctgcaactgctc
gatggcgcggtggaagatgatttcctcgctcatcgagaccaggcgattcttgagctgttc
tattcctccgggctgcgcctgtcggagctgaccagcctcgacctcgaacagctggacctg
gccgatggcctggtgcaggtccacggtaagggcagcaagacccgggtcctgccggtcggc
aagaaggcccgcgaggcgctgcagctgtggctgccgctacgggcgctgagcaatccgccg
gacgacgcggtgttcgtcagccagcagggccggcgcctgggcccacgggcgatccagcta
cgggtcaaagccgccggcgagcgcgagctgggacagaacctgcatccgcatatgttgcga
cattccttcgccagccacatgctggaatcctcccaggacctgcgcgccgtacaggaactg
ctggggcactcggatatcaagaccacgcagatctatacccacctggacttccagcacctg
gcagcggtctacgacagcgcccacccacgggccaaacgcaacaaaggcggtgagtaa
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