Pseudomonas chlororaphis subsp. piscium: C4K32_6230
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Entry
C4K32_6230 CDS
T09060
Name
(GenBank) Phosphogluconate repressor HexR, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchp03000
]
C4K32_6230
Transcription factors [BR:
pchp03000
]
Prokaryotic type
Helix-turn-helix
Other families
C4K32_6230
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AZC72847
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Position
complement(6806033..6806899)
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC
SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREKLDPVELQR
AVTLMSQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAI
CISQSGRSKDLLITANLVRESGASLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSVKALDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
ttgaatctgttgcagcacattgcccaatcacgccatctcttgcgcaagtcggagctcaag
gtcgccgatcatgtgctgctcgaccctgcggctgtgatgcacagttccatggccgacctg
gcccacagcgtgggtatcagcgagccgaccatcgtgcgcttctgccgggccatcggttgc
tcggggttccaggacctgaagctcaagctggcccagagcctggctgccggggcaagcttc
ggccagtttgcgattcacgaagacgattcggtcgccgactacagcctgaagatcttcgac
accaccctgcacaccctgatggaggttcgcgagaagctcgatccggtggagctgcaaagg
gctgtgaccctcatgtcccaggcccagcgcgtggagttctacggcttcggcgcttccggc
gcggtggcggcggacgcccagcacaagttcttccgcctgctgctgaccgcggcggcctat
tccgacccgcatatgcaggcgatgtcggcggtgaccctcaagcccaccgacgtggcgatc
tgcatttcccagtccgggcgttccaaggacctgctgatcaccgccaacctggtgcgtgaa
agcggcgcctcgctgatcaccctgtgcccgagccaaacgccgctggccgagctgtcgacc
gtcaacctggcgatcgacgtgcacgaagacaccgagatctataccccgctgacctcgcgc
atcgcccacctggtggtgatcgacgtcctggcgatgggcgtggccatggcccgcggcccg
agcctggtcaaccacctcaagagcgtcaaacgcagccttcgcagcctgcgcctgtcgccc
aagtcggtgaaagccctggacgactga
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