Pontibacillus chungwhensis: QNI29_00695
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Entry
QNI29_00695 CDS
T09116
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pchu
Pontibacillus chungwhensis
Pathway
pchu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QNI29_00695 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchu03021
]
QNI29_00695 (rpoC)
03400 DNA repair and recombination proteins [BR:
pchu03400
]
QNI29_00695 (rpoC)
Enzymes [BR:
pchu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QNI29_00695 (rpoC)
Transcription machinery [BR:
pchu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QNI29_00695 (rpoC)
DNA repair and recombination proteins [BR:
pchu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QNI29_00695 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WIF98248
UniProt:
A0ABY8UYH4
LinkDB
All DBs
Position
133543..137160
Genome browser
AA seq
1205 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGIVCDRCGVEVTKAKVRRERMGHLELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFAAYVVTDQGDTALEKKQLLSEKEYRTYREKYGKSFQAMMGAEAIRRLLQ
DIDLEKEVDTLKEELKTAQGQRRTRAIKRLEVLEAFRGSGNDPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPTIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKMYQCGLPKE
MALELFKPFVMRELVDRGLAHNIKSAKRKIERIHPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREEAVGEGKVFKDTNEALIAYQNGYVHLHTRVAVH
ARSLNNGTFTEEQNNQLLLTTVGKLIFNEILPESFPYINEPTQSNLEGKTPEMYFIEKGT
DVREEIKKRELVPPFKKKILGNIIAEVFKRFKISETSKMLDRMKDLGFAYSTKAGITVGV
SDIVVLPEKQEILEEAQGKVDKVMKQFRRGLITDDERYDRVIAIWSAAKDDIQDRLMQSL
DPANPIFMMSDSGARGNASNFTQLAGMRGLMANPAGKIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLEVASLTEGTEMIEPLI
DRLIGRTAFKKVHNPETGEVMAKRDQIITEDMARSIVDAGVEKVTIRSAFTCNTRHGVCK
KCYGRNLATGSEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQAVISEIHGTVEEINEVKEKLEITVQGEVEKRSYTAPYGARMKVTVGDSVKAG
EELTEGSVDPKELLKIQGVEGVEMYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRVL
DAGDTDVLPGSLLEIHQFRDANRDALIEGSQPAVGRPVLLGITKASLETDSFLSAASFQE
TTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMPRYRSVQPASDELTEDMIKAEEPE
EIPQS
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaacaactttgaatatatgaagattggtttagcttcacctgataaaatc
cgttcgtggtcatttggtgaagtgaagaaaccagaaaccattaactatcgtacgttaaaa
ccggaaaaagacggtttgttctgtgaacgcatttttggtcctacaaaggactgggaatgt
cactgtggtaaatacaagcgagttcgttataaagggatcgtttgtgaccgctgtggagta
gaagttaccaaagcgaaagtacgtcgtgagcgtatggggcacttagaattagctgcccct
gtctctcacatttggtacttcaaaggaattccaagtcgtatgggacttgttcttgatatg
tcaccacgtgctttagaagaagtcatttacttcgctgcatatgtggtaacagaccaaggt
gatacagctcttgaaaagaaacagttactttctgagaaagaataccgtacgtaccgcgag
aagtacgggaagtccttccaagccatgatgggtgctgaagccattcgtagattgcttcaa
gatatcgatcttgagaaggaagttgacacgcttaaggaagaactgaaaacagcccaaggc
cagcgtcgtacacgcgctattaaacgtttagaagtattagaagcattccgtggttcagga
aatgatccgtcttggatgatcctagacgtgcttcctgtcatcccgccggaacttcgcccg
atggtacagcttgacggtggacgcttcgcaacttctgatttaaacgatctttatcgtcgt
gtaatcaaccgtaacaatcgtttgaagcgtttattagatcttggagcacctacgattatc
gttcaaaacgaaaaacgtatgcttcaggaagctgtggatgctttaatcgataacggccgt
cgtggtcgtccagtaactggaccaggaaatcgtcctctaaaatccctttctcatatgttg
aaaggtaagcaaggtcgtttccgccaaaacttacttggtaaacgtgtagactattcaggt
cgttctgtaatcgtcgtaggacctagtctgaagatgtaccagtgtggtttacctaaagaa
atggctttagaattatttaaaccatttgttatgcgtgaacttgttgaccgtggactagca
cacaacattaaatctgctaagcgaaaaattgaacgtattcatccagaagtttgggatgtc
ctagaagaagttattaaagagcacccagtgttactgaaccgtgcccctacacttcaccgt
ttaggtatccaagcgttcgaacctactcttgtagaaggtcgtgcaattcgcctgcaccca
ttagtatgtacagcttataacgctgactttgatggtgaccaaatggctgttcacgttcca
ttatctgcagaggcgcaagcagaggctcgtatcttaatgctagctgctcagaacatcctt
aaccctaaggacggtaaaccagttgtaacaccttcacaggatatggtattaggtaactat
tacctgacacttgagcgtgaagaagcagttggggaaggcaaagtatttaaagatacaaac
gaagcactaattgcttaccaaaatggttatgttcacttacacacacgtgtagctgtgcat
gcccgttcattaaataatggcacatttactgaagaacagaataaccagcttctattaacg
acagttggtaaactgatcttcaatgaaattctgcctgaatccttcccttatattaatgaa
ccgactcaaagtaaccttgaaggcaaaacgcctgaaatgtacttcattgagaagggaaca
gatgtaagagaggaaattaagaagcgcgaattagttcctccatttaagaagaagattctt
gggaacattatcgcagaagtcttcaaacgctttaagatcagtgaaacgtctaaaatgctt
gaccgcatgaaggacctaggtttcgcttactctacaaaagctggtatcacggttggtgta
tctgacattgtggtacttccagagaaacaagagattcttgaagaagctcaaggtaaagtt
gataaagtcatgaaacagttccgtcgtggtttaatcactgatgatgagcgttacgatcgt
gttattgcaatttggtcagcggccaaagatgatattcaagatcgtctaatgcaatcactt
gatccagccaacccgatcttcatgatgagtgattccggagctcgtggtaacgcatctaac
ttcacacagttagcgggtatgcgtggacttatggccaacccggctggtaagatcattgaa
cttccgattaaatcaagtttccgtgaaggtctgacggtactagagtacttcatctctaca
cacggtgctcgtaaaggtcttgccgatacggcactgaagacagccgattcaggttaccta
actcgtcgtttagttgacgttgctcaagacgtaatcgtccgcgaagacgactgtggtact
gatcgaggattagaagtagcgtctcttactgaaggtacagaaatgattgaaccgctaatc
gaccgtttaatcggacgtacagcgttcaaaaaggttcataacccagagacaggcgaagtg
atggctaaacgtgatcaaattattacagaagatatggcccgttccattgttgatgctggt
gttgaaaaagtaacaatccgctcagcgttcacatgtaacacgcgtcatggtgtatgtaag
aaatgttacggccgtaacttagcaactggatctgaagtagaagtaggagaagcagttgga
attattgctgcacaatcaattggtgagcctggtacacagcttacaatgcgtaccttccac
acaggtggtgtagcaggggatgacatcacacagggtcttcctcgtatccaagagctattc
gaagcccgtaacccgaaaggtcaagctgttatcagtgagatccatggtacggttgaagag
attaatgaagtgaaagagaaattagagatcacagtacaaggcgaagttgaaaaacgtagt
tacacggctccttatggcgcccgtatgaaagtaacagttggagattccgtcaaggctggt
gaagaactaacagaaggttctgtagatccgaaagaactactgaaaatccaaggtgtagaa
ggcgttgaaatgtatcttctacgtgaggttcagaaagtataccgtatgcagggtgtagaa
atcggggataaacacgttgaagtaatggttcgccaaatgcttcgcaaagtacgtgtcctt
gatgctggtgatacagatgtacttcctggctcactacttgagatccaccaattccgtgat
gctaaccgtgatgcccttattgaaggtagccaacctgctgttggtcgtcctgttctgctt
ggtattacgaaagcatctcttgaaacggattccttcttatctgccgcatcattccaggag
acaacacgtgtcctaacggatgcagcgattaaaggtaaacgtgacgaattgctaggactt
aaagaaaatgttattattggtaagttggttccggcaggtacggggatgcctcgctatcgt
tccgtgcaaccagcttctgatgaattaactgaagatatgattaaagctgaagagcctgaa
gagattccacagtcttaa
DBGET
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