Pontibacillus chungwhensis: QNI29_04705
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Entry
QNI29_04705 CDS
T09116
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pchu
Pontibacillus chungwhensis
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchu03400
]
QNI29_04705 (addA)
Enzymes [BR:
pchu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNI29_04705 (addA)
DNA repair and recombination proteins [BR:
pchu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QNI29_04705 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
DEAD
AAA_12
AAA_30
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WIF98959
LinkDB
All DBs
Position
907498..911223
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AA seq
1241 aa
AA seq
DB search
MPSWTPEQEQAIYTSGKDVLVSAAAGSGKTAVLVERIIQKLLNQDNPTDIDTLLVVTFTN
AAAQEMRNRVGEALEKALEENPGSMHLKKQLSLLQRASISTLHSFCLDVVRRYAYQLDLD
PQFRIADEIEGDLIRQEILEDLFEEWYGKDGEEREAFFEVVNRFSGDRSDQEVESLMLSV
YNFAMQNPWPETWMEKVSGMYHVTKDTPEEEIEWLTILKREVKSQLHAMLADSEQALNLT
REPDGPYHYAEAIDDDREKIQQALGLVDISWHELQQFMENAGGFKALSRKKVECSDELKD
QVKTLRDRYKKRFTSLKEDWFARSLPAHLGDMKTLAPVVDQLMVLVKEFHERFQKKKKEQ
ALVDFADLEHYCLQVLMDENSTPGDISPSEVAKGYQAQFTELLVDEYQDTNLVQETILRM
VTDGEHAGNLFMVGDVKQSIYRFRHAEPTLFLQKYKEFAGEDHPSERIDLARNFRSRKEV
LHGTNYIFRQLLDEEVGEMTYDKDAELIYSNTIYDELTSADADAELLVIDRQAPEDPTAI
ETGEEGFQDLEKAQIEARAYAQKIRQWLGHGDEEALQVVDKETGMKRSIQFRDIVILMRS
MTWAPTIVEELKQQGIPVYAELSSGYFEAIEIKIMISLLKVIDNPRQDIPLASVLRSPIV
GLNEDELTNVRLAKRKASYYEALQAYKRVGDDDRLAGKVEHFLMRLETWRVRARQGSLSE
LIWQVYRETGYYDFVGGIPGGRQRQANLRALYDRSRSYEATSFRGLFRFLRFIERIEERG
EDLGAAKALGEQEDVVRIMTIHKSKGLEFPAVLLGGMDKQFNQQDLMSKYLLHKDHGFGS
KFIDPNKRIMYPTLAYHALKKEKQRELLAEEMRVLYVALTRAKEKLVMVGNVASLEKKLL
KWREWVEHPHWVLPAHYRLESKSYLDWVAPALIRHQQNEELRGTGSIMRVPESIVHDEST
WRISLLHSSAYQNPNRVEEKQSEALEQAIREWKQVGETHEEEDEVSRRLSFMYPHQNAIH
HRAKQSVTELKRQREVPDEYSADSLIREFKQPIVKRPRFMQENRSLTAAEAGSAMHTVMQ
HLPFTRKLSAAEIEEYVELYVEKEHLTREEADAINIQAIEAFFESEMGEMVIESSEVHRE
VPFTLTIPAHEVYADWKEETDETVFVQGVIDCILPGEGGWIILDYKTDKIQEGQTEESLK
ERYSTQLSLYAEALSRIWKKPITAQYLYFFDATLLTRVDER
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgccatcctggacaccagaacaagaacaagctatttacacgagcggtaaggatgttctc
gtttcggcagcggccggatcagggaaaaccgctgttctcgtggaacgaatcattcaaaaa
ctacttaatcaggacaacccgacagatattgatacgttactcgttgtgacgttcacaaat
gcagcggcccaggaaatgcgtaaccgtgtaggagaagcccttgagaaagcattagaagag
aatccaggttccatgcacttgaagaaacaactatcactcttgcaacgtgcatccatttca
acgcttcactccttttgtttagatgtggtccgtcgttatgcctatcagcttgatcttgat
ccacaatttcgtattgcggatgagatcgagggagatcttattcgtcaggaaattttagag
gatctgttcgaagaatggtacgggaaagacggagaagagcgagaagccttctttgaagtt
gtgaatcgcttctcaggggacaggagtgaccaggaagttgaatcgcttatgctgtccgtt
tataactttgcgatgcaaaatccgtggccagagacgtggatggagaaagtatcagggatg
tatcatgtgacaaaagacacccctgaagaggagatcgagtggttaacgattttaaaacgg
gaagtgaagagtcagcttcacgctatgcttgcggattcagaacaagccttaaacctgacc
cgtgagccagatggtccgtatcattacgccgaggccattgatgatgaccgggagaaaatc
cagcaggcacttggtcttgtggacatttcctggcacgagcttcagcagtttatggagaac
gcaggtggctttaaagctctgtcccgtaaaaaggtggagtgctcggatgaattgaaagat
caggtgaagacgctcagagatcgttacaagaaacgattcacttctttaaaagaagactgg
ttcgcccgctctcttccggcgcacttaggcgatatgaagacgttagccccagtcgttgat
caactgatggtccttgtgaaagagtttcacgaacgtttccagaagaagaagaaagaacaa
gccctcgtcgactttgccgatcttgaacactattgtttgcaagtcttaatggatgagaac
tctacaccaggggacatatcgccttcagaagtggcgaaggggtaccaggctcagtttacc
gaactgttagtggatgagtaccaggatacaaaccttgttcaagagaccatattgagaatg
gtgacagatggtgaacatgctgggaacctctttatggtaggggatgtaaagcaaagtatt
tatcgcttccgtcacgctgaaccgacgcttttcttgcaaaagtataaagagttcgctgga
gaagaccatccttctgagcgaattgacttagctcggaatttccgaagtcgaaaagaagtc
cttcacgggaccaattatattttccgtcagcttcttgatgaagaggtcggagagatgacc
tatgacaaagatgcagagcttatttatagcaacaccatttacgacgaattgacctctgct
gatgcggatgcagaactcctggtgattgatcgtcaagcaccagaagacccaactgctatt
gagacgggcgaagaaggctttcaagatctggagaaggcccaaattgaagcccgtgcctac
gcgcaaaaaatcagacagtggcttggtcacggagacgaagaagcgctgcaggttgtggat
aaagaaaccgggatgaagcgaagcattcagttccgggacattgttattctgatgcgttcg
atgacgtgggccccaacgattgttgaagagttaaagcaacaagggatacccgtttatgct
gagctatcttcaggttatttcgaagccattgaaataaaaattatgatcagcctgttaaaa
gtcattgataatccgagacaagatatccctcttgcatctgtccttcgttccccaattgtt
ggactaaatgaggacgagctcacaaacgttcgactggcaaaacgaaaggcttcctattat
gaagcgcttcaggcctataagcgtgtcggagacgatgaccgtctcgccgggaaagtggag
catttcttgatgaggcttgaaacgtggcgtgtgcgtgcccgccaaggttctttatcagag
ctgatctggcaagtctaccgcgaaaccggttattacgatttcgtagggggtattccaggg
ggacgtcaacgtcaggccaatctccgagccctttatgaccgctcaaggagttacgaagca
acctcgttcagaggattattccgtttccttcgttttatcgaacgaattgaagaacgaggg
gaagaccttggtgctgcgaaagctctcggagaacaagaagacgtggtacggattatgaca
atccacaagagtaaaggtcttgaattcccggctgtcctgttaggtggtatggacaaacag
ttcaatcagcaggatttaatgtcgaaatacttactacacaaagatcacgggttcggcagt
aaatttatcgatccgaataaacggattatgtatccaacccttgcctatcatgctttaaag
aaagaaaagcaacgggagctcctggctgaagagatgcgtgtgttgtatgtggccttaaca
cgtgcgaaggagaagctcgttatggtcggaaatgtggcttctcttgagaagaagcttttg
aagtggcgagaatgggttgaacatcctcattgggttctcccggctcattaccgattagaa
tccaaatcttacttggactgggtagcacccgcgcttattcgccaccagcagaatgaagaa
ttacggggcacgggttccattatgcgcgtaccagaatcaatcgttcacgatgaatccaca
tggagaatcagtcttctgcatagcagtgcctatcagaatccaaatcgtgtggaagagaaa
cagagtgaagctttagaacaagcgattcgagagtggaaacaggtgggtgaaacgcatgag
gaagaggatgaagtgagcaggcgcctatcctttatgtaccctcaccaaaacgcgattcac
caccgggctaagcagtctgtgactgaattgaagcgccagcgtgaagtgcctgatgagtat
agcgccgattctttaattcgggagtttaagcaaccgatcgtaaagcgccctcgttttatg
caggaaaaccgttctttaacagcagcagaagcgggtagtgcgatgcacacggttatgcag
catctgccgtttacgaggaaattatcagccgctgaaattgaagagtatgtggaactctat
gtcgagaaagaacacctcacaagagaagaagcggatgcgattaacatccaagccatcgaa
gcattctttgaaagtgagatgggtgagatggtcatcgagtcttcagaggtccatcgggaa
gtaccattcacattaaccattcccgctcatgaagtgtacgcagactggaaggaagaaacc
gatgaaactgtatttgttcagggtgtgatcgactgtatcctccctggtgaaggcggctgg
atcattcttgactataagacggataaaatacaagaaggacaaacggaggaatcgttaaaa
gaacgatacagcacccaattgtccctctatgcagaagccctgagccgaatttggaagaaa
ccaatcacggcacagtatttgtatttctttgatgcaacgttgttaactcgagtagacgag
aggtga
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integrated database retrieval system
