Pontibacillus chungwhensis: QNI29_06915
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Entry
QNI29_06915 CDS
T09116
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pchu
Pontibacillus chungwhensis
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchu03019
]
QNI29_06915
Messenger RNA biogenesis [BR:
pchu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QNI29_06915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Snu56_snRNP
Cas3_HD
TraI_2
HMMR_N
Motif
Other DBs
NCBI-ProteinID:
WIF99383
LinkDB
All DBs
Position
1319025..1320008
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AA seq
327 aa
AA seq
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MAITDFKELTESGLYFDGYALVKSAQEATTKGGVPFFNITLSKQEKSISTKLWENKFNNH
DLAQLKKVFENGNVLHIKGKLSEYREQLQLTIDEFAFPEDGVVQVEDYLESAPEPIESLK
QEYENYIANIESPVLKEICQRLYDEHQDKFITYPAAKSNHHCFTGGLLYHTVSMLRLGDH
ISNQYKEVKKDLVMAGIALHDMGKVVEYTNYFAPDYSKVGNFLGHITIINMFIDRKVQVL
KEEMPWTRKEADEVYELMHVINAHHGKLEYGSPVESKILEAEVVHQVDMMDSRINMITYG
LQDENLQENEAKRIYPMGMYYRTSQSD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtggcaattacagactttaaagaattaacggaatcaggactctattttgacggatatgcc
ctggtcaaatcagctcaggaagcaacgacaaagggcggcgttcctttttttaatattacg
ctttcgaaacaagagaaaagtatttcaacaaaactttgggaaaataaatttaacaaccat
gatcttgcgcagcttaagaaggttttcgagaatggaaatgttcttcacattaaagggaaa
ctgagtgaataccgtgaacagcttcagttaacaattgatgagtttgcttttccggaggat
ggtgtggttcaggttgaggactatctggaatcggcaccggaaccgattgagagcttgaaa
caggagtacgagaattatattgcaaacattgagagcccggtgctgaaggagatctgtcag
cgtctttatgatgagcatcaggacaaattcattacctatccggctgcgaaatcgaaccac
cactgtttcacaggtggactgttgtatcatacggtttcaatgcttcgtcttggagatcat
atttcaaaccagtataaagaggtcaagaaagatcttgtgatggctgggattgcgcttcat
gatatggggaaagtggtcgagtacacgaattatttcgcgccagactattcgaaggtcggt
aatttcctgggacatattacgattatcaatatgttcattgaccgaaaagtacaagttctg
aaagaggaaatgccatggacacgtaaggaagcggatgaagtgtatgaactcatgcacgtc
attaacgcccatcacgggaaacttgagtatggtagtcccgttgagagtaagatcttagaa
gcagaagtcgttcaccaggtggatatgatggatagtcgtattaatatgatcacatacggg
cttcaggatgagaatttacaggaaaacgaagcgaaacgcatttatccaatggggatgtat
taccgtacatctcaatctgattaa
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