Pontibacillus chungwhensis: QNI29_09910
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Entry
QNI29_09910 CDS
T09116
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pchu
Pontibacillus chungwhensis
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchu03032
]
QNI29_09910 (topA)
03400 DNA repair and recombination proteins [BR:
pchu03400
]
QNI29_09910 (topA)
Enzymes [BR:
pchu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QNI29_09910 (topA)
DNA replication proteins [BR:
pchu03032
]
Prokaryotic type
DNA Topoisomerases
QNI29_09910 (topA)
DNA repair and recombination proteins [BR:
pchu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QNI29_09910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Toprim_2
HypA
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
WIF99950
LinkDB
All DBs
Position
1913831..1915912
Genome browser
AA seq
693 aa
AA seq
DB search
MADYLVIVESPAKAKTIEKYLGKKYTVKASMGHVIDLPKSQMGVDVEEDYKPKYITIRGK
GPVLKEIKTAAKKAKKVYLAADPDREGEAIAWHLAHSLNMDETSQCRVVFNEITKDAIKE
SFKHPRTIDMDLVNAQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKMIMDREN
EIKSFEPEEYWSIDGSFVKDAEQFEGAFYGIDGKKQKLSSKEEVDNILTQMSGEDFRVDK
VNKRERRRNPASPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIQLSKKEGTVGLITYM
RTDSTRISQTAKDEAAGYIEEQYGKDYLGSGNQKKSQKSQNAQDAHEAIRPTSSLRTPKA
MKEYLSRDQYRLYKLIWERFVASQMASAVLDTMTVHLLNEGVEFRATGSKVKFKGFMRVY
VEGNDDNKKEEDKILPDMEEGTTVKADTIQPNQHFTQPPPRYTEARLVRTLEEMGIGRPS
TYAPTLDTIQRRGYVSLDNKRFVPTELGEIVIELLKEYFPEIINVDFTVQMEGNLDAVEE
GNKEWVQIIDDFYKDFEKRLTTAEKEMEEIEIKDEPAGIDCEECGHEMVYKMGRYGKFLA
CSNFPECRNTKPILKEIGVKCPRCKEGNVVERKSKKKRTFYGCDRYPECEFISWDKPISR
PCPKCDSMLVEKKAKKGTQVQCSECDYKEELQQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatcttgttattgtagaatcaccagcaaaagcaaaaacaattgaaaaatat
ttaggaaaaaagtacacggtaaaagcatctatgggtcatgtaattgacttgcctaaaagt
caaatgggtgtagatgtagaagaagattataaacctaaatacattaccatcagagggaaa
ggccctgtattgaaagaaattaaaacagctgcaaaaaaggctaaaaaagtctatctcgca
gccgaccccgatagagaaggggaagccattgcctggcacttagctcacagtttaaacatg
gatgagacatcccagtgtcgagttgtatttaatgagattacaaaggatgcaattaaagaa
tcctttaagcatccacgtacgatcgacatggatttagttaatgctcagcaagcaagacgc
gtattagatcgtttagtcggttacaatatcagcccgttattatggaaaaaggtcaaaaaa
ggccttagtgcaggtcgggtacaatccgtagctgtcaaaatgattatggaccgtgaaaat
gaaattaaaagcttcgaacctgaagagtactggtccattgatggtagctttgtcaaggat
gctgaacaatttgaaggagctttctatggaatagatggaaagaaacaaaagctcagttcc
aaagaagaagtggataacatcctcacccaaatgagcggggaagatttcagagtggataag
gtgaataaaagagaacgtcgtcgtaatccagcttccccttttactacatcatctctacaa
caagaagcagcacgaaaattaaatttccgagcaaagaaaacgatgatgttagcacagcaa
ttatatgaagggattcagcttagcaaaaaagaaggtacagtaggtttgatcacctatatg
cgtacagactctactcgtatttcccaaacggcgaaggatgaggctgctgggtatattgaa
gagcaatacggaaaagattaccttggatcaggaaaccaaaagaaatcacagaaatctcaa
aacgctcaagatgcacacgaagctatccgccctacctcttcgttacgtacacctaaggct
atgaaagaatatttatcaagagatcagtatcgcttgtataaactaatttgggagcggttc
gtagcgagtcaaatggcttccgcagttcttgatacgatgaccgttcatctactgaatgaa
ggtgtagagttcagagccacaggttcaaaagttaagtttaaagggtttatgcgtgtctat
gtcgagggcaatgatgataataagaaagaagaagataaaattctaccagatatggaagaa
gggacaacggttaaggctgacactattcaaccgaatcaacatttcactcagccacctcca
cgctacactgaggcccgtcttgtacgaacattggaagaaatgggaattgggcgtccgtcc
acttatgctcctaccctggacacgattcagcgaagaggatatgttagtttagataataaa
cggtttgtccctactgaactaggtgaaatcgtgatcgaattgttgaaagagtatttccct
gaaatcattaatgttgatttcaccgttcaaatggaaggcaatcttgacgcggttgaagaa
ggcaataaagagtgggtccaaatcatcgatgatttctataaagactttgaaaagcgcctc
accactgccgagaaagagatggaagaaatcgagattaaagatgaaccagccggaattgat
tgcgaggaatgtggtcatgaaatggtttataaaatggggcgatatggtaagtttctggcg
tgctccaactttccggagtgtcgaaatacgaaacctatcctgaaagaaatcggggtaaaa
tgcccacgttgtaaagaagggaacgttgtggagcgtaaaagcaaaaagaaacgtaccttt
tatggctgtgatcgatatcctgagtgtgaattcatctcttgggataagccgatcagtcga
ccatgtcctaagtgcgattccatgctagtagaaaagaaagcgaaaaaaggaacgcaagta
cagtgttcagaatgtgactataaagaagaactccagcagtaa
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