Pontibacillus chungwhensis: QNI29_10210
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Entry
QNI29_10210 CDS
T09116
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pchu
Pontibacillus chungwhensis
Pathway
pchu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNI29_10210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchu03019
]
QNI29_10210
03016 Transfer RNA biogenesis [BR:
pchu03016
]
QNI29_10210
Enzymes [BR:
pchu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QNI29_10210
Messenger RNA biogenesis [BR:
pchu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QNI29_10210
Transfer RNA biogenesis [BR:
pchu03016
]
Prokaryotic type
tRNA degradation factors
QNI29_10210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
S1_2
LCIB_C_CA
Motif
Other DBs
NCBI-ProteinID:
WIG00180
LinkDB
All DBs
Position
1970907..1973024
Genome browser
AA seq
705 aa
AA seq
DB search
MAEEKQVFSTEIAGRPLRIEIGELAKQASGACMVQYGDTSVLATATGSKEPKDLPFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAVLASRLIDRPIRPLFPDGFRNEVQVISTVMSV
DQDCSSEMAAMLGSSLSLSISDLPFNGPVAGVIVGRVDGEFIINPTIEQQENSDIQLTVA
GTKDAVNMVEAGADEVPEEVMLEAIMFGHEEIKRLVAFQEEVIAAVGKEKREVTLFELDA
DIVAEVEGKAKDALIKAIQTEEKHARDEAITEVKNNVIAEYEESEEESEKLGQVKSVLDK
IVKEEVRRLITKEKVRPDGRKPEEIRPLSSRVGILPRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLDLEESKRFMHHYNFPHFSVGETGPMRGPGRREIGHGALGERALEKVVPSEE
DFPYTVRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKSGEDYTVLT
DIQGMEDFLGDMDFKVAGTEKGVTALQMDIKIEGLSRSILEDALTQAKAGRKEILDSMMA
TIEQPREELSAYAPKILTMAIKPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGKIFISS
TDAEANRNAKQIIEDLVREVEVGEIYLGTVKRIEKFGAFVELFKGKDGLVHISQLAEERV
GKVEDVVAIGDQLKVKVKEIDNQGRVNLSHKDVLIEQKKQQEATE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaaaacaagtattctccactgaaattgctggccgtcctttacgtattgaa
attggagagttagcgaaacaagcaagtggagcatgtatggtgcaatacggagacacatct
gttttagcaaccgcaacaggatctaaagaaccaaaagacttgccgtttttccctcttact
gtgaactatgaagagagattatatgctgtcggtaaaatcccaggtggctttattaagcgt
gaaggacgtcctagtgagaaggcagttcttgcttctcgtctaattgaccgtccaatccgc
ccgttgttccctgacggctttcgtaatgaggttcaagttattagcacagtaatgagtgtg
gatcaggattgttcatctgaaatggcggctatgctaggttcatccctttcattatctatt
tcagatttacctttcaatggcccagtagctggtgtaattgtcgggcgagttgatggagag
tttatcattaatccaacaattgaacaacaagaaaatagcgacattcagttaactgtagca
ggaacaaaagatgcagtgaacatggtagaagcaggtgcagacgaagtacctgaagaggtc
atgttagaagcaattatgtttggtcatgaagagattaaacgccttgtagctttccaagaa
gaagtaattgctgctgttggcaaagagaagcgtgaagttacgttattcgaactagacgcg
gatattgttgcagaagtagaaggaaaagcaaaagacgctctaattaaagccattcaaaca
gaagaaaagcatgcgcgtgatgaagcaatcactgaagttaaaaacaatgttattgctgag
tatgaagagtcagaagaagaaagtgaaaaattaggtcaagttaaatctgtacttgataaa
attgtaaaagaagaagtgcgccgtttaatcacgaaggaaaaggtacgtccagatggccgt
aaaccagaagagattcgtcctttatcctctcgcgttgggattcttcctcgtacacacggt
tcagggctattcacacgtggacaaactcaagcactaagtatctgtacattgggagcatta
ggcgatgtgcaaattcttgatggtcttgatttagaggaatcaaaacgattcatgcaccat
tataacttcccacattttagtgtaggtgaaacaggacctatgcgtggaccgggacgtcgt
gaaattggtcatggtgccctcggtgaacgtgctcttgaaaaagttgtaccttctgaagaa
gatttcccttacacagtacgccttgtttctgaagttctagaatctaatggttctacatca
caagcaagtatctgtgcaagtaccctcgcgatgatggatgctggtgttccgatcaaagca
cctgtagcaggtattgcaatgggtcttgttaaatctggtgaggattatactgttcttact
gatattcaaggtatggaagacttccttggagatatggactttaaagtagcaggtaccgaa
aaaggtgtaactgctctacaaatggatattaagattgaaggactatctcgctctatctta
gaagatgctcttacacaagcgaaagctgggcgtaaagaaattcttgatagcatgatggct
acaatcgagcaaccaagagaagagctttctgcatacgctccgaaaatccttacaatggct
attaagcctgataagattcgtgacgttatcggaccaagtggtaaacaaatcaacaagatt
atcgaagagacaggcgttaaaatcgatattgaacaagacgggaaaatcttcatctcttct
acagatgcagaagcaaaccgtaatgcaaaacaaattatcgaagaccttgttcgagaagtt
gaagttggcgaaatttacttgggtactgttaaacgtatcgagaaattcggtgctttcgtt
gaactatttaaagggaaagatggattagtccacatctctcaattagctgaagaacgtgtt
ggaaaagtagaagacgttgtagctattggagaccagttgaaggttaaggttaaagaaatc
gataaccagggtcgcgtcaacctttctcataaagacgttctaattgaacaaaagaaacaa
caagaagctacagagtag
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