Pontibacillus chungwhensis: QNI29_11725
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Entry
QNI29_11725 CDS
T09116
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pchu
Pontibacillus chungwhensis
Pathway
pchu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNI29_11725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchu03019
]
QNI29_11725
03400 DNA repair and recombination proteins [BR:
pchu03400
]
QNI29_11725
Enzymes [BR:
pchu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNI29_11725
Messenger RNA biogenesis [BR:
pchu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNI29_11725
DNA repair and recombination proteins [BR:
pchu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QNI29_11725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Glyco_tran_WecG
SKI
Reo_sigmaC
Motif
Other DBs
NCBI-ProteinID:
WIF96422
UniProt:
A0ABY8URX5
LinkDB
All DBs
Position
complement(2262382..2263917)
Genome browser
AA seq
511 aa
AA seq
DB search
MQDRPLEKTLYKHFGYEQFREGQKEIIEELLNGNDVLGILPTGTGKSMCYQLPSLLLEGT
VIVVSPLISLMVDQVKQLKQQGMKRVVAINSFLTPMQKQQVYDHINHYKLIYCSPEMLQN
AQFMQTLKEKVSVSLFVVDEAHCISQWGHEFRTDYLKLDDTLKQLNNPTVLALSATAPVH
VQNDIMRQINRPDMQKHIFPMDRENIAFTVEHVTGMEEKIERIASVLKTHPVPTMIYFSS
RQWTEKAAYELTQATSGLRVAYYHGGMEQTDRLLIQQQFMNDQLDVICCTSAFGMGVNKS
NIRLVIHAHIPSQVESFLQEVGRAGRDGEQSVSLTFYSPGDGEIPKRFIESELPSAELVS
DAIQYLQNIAQNGRLLPLQPEEIEESLQISEVQWRFLAYQFEKNGVIKGRKVVHQANWGE
AYHSIVAFIKERTNIKQNKLTELLNWVHSKDCLRASLYQSFQSSYKTPVGFCCDRCDFSF
NLWETSETPDRMELLGWEKELQKVFLQGEYQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacagaccacttgaaaaaacactatataaacactttggttatgagcaatttaga
gaagggcaaaaggaaattattgaggaattactaaatggcaatgatgtcttagggatattg
ccgactggcactggtaaatcgatgtgttatcaattaccatctcttttattggaaggtaca
gttattgttgtaagccccttaatttctttaatggtggatcaagttaagcagttaaaacaa
caaggaatgaaacgtgtggttgctattaatagctttttaactccaatgcaaaagcaacag
gtttatgatcacatcaatcactataagttaatctattgttcacccgagatgcttcagaat
gctcagtttatgcagaccttgaaagaaaaagtttctgtatccctattcgttgtagatgaa
gcccattgcatttctcaatggggtcatgaatttcgaacagattacttgaagctagatgat
acgcttaaacagttaaataacccaactgtattggctttaagtgctacagctccggttcat
gtccaaaacgatattatgagacaaataaacagacccgatatgcagaaacatatctttcct
atggaccgtgagaatatcgcatttacagttgaacatgtaactggaatggaggaaaaaatt
gagcggattgcttctgttttaaagactcacccagttcctacaatgatttacttctccagt
cgtcagtggacggagaaagcggcttacgaattaactcaagctacaagcggattaagggtt
gcctattatcatggtggaatggaacaaacagatcgtttattaatccaacagcagtttatg
aatgatcaacttgatgttatttgctgtacaagtgcctttggtatgggggttaacaaaagt
aatatacgtcttgttattcatgctcatatcccctctcaagtggaatccttccttcaggaa
gtgggacgcgcgggaagggatggggaacaaagtgtgagcttaaccttttatagtcctggt
gatggggaaattcctaaacgttttatagaatcagaactgccttcagctgagctcgtttca
gatgctattcagtatttacaaaacattgctcaaaatggccgtctgcttcctttgcaacca
gaagaaattgaggaaagccttcagattagcgaagttcaatggcgcttcttggcgtatcag
tttgagaaaaacggtgtaatcaaaggcaggaaagttgtacatcaagcaaattggggagaa
gcttatcattctattgtggcttttattaaagaaagaaccaatatcaagcaaaataagcta
acggaacttttaaattgggttcattctaaagattgtttaagggctagcttatatcagtct
tttcagtcttcctataagactccagttggtttttgttgtgaccgttgcgatttttcattt
aatttatgggaaacaagcgaaactcctgatcgaatggaactattaggatgggaaaaggag
ttgcagaaggtctttttgcaaggagaatatcaatga
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