Pontibacillus chungwhensis: QNI29_19605
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Entry
QNI29_19605 CDS
T09116
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pchu
Pontibacillus chungwhensis
Pathway
pchu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QNI29_19605 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchu03021
]
QNI29_19605 (rpoE)
03400 DNA repair and recombination proteins [BR:
pchu03400
]
QNI29_19605 (rpoE)
Transcription machinery [BR:
pchu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QNI29_19605 (rpoE)
DNA repair and recombination proteins [BR:
pchu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QNI29_19605 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
BUD22
DUF5089
WHD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
WIF97904
UniProt:
A0ABY8UZC3
LinkDB
All DBs
Position
complement(3852255..3852833)
Genome browser
AA seq
192 aa
AA seq
DB search
MSFKNYSHDEIAEMSMLEIAHEILLDEKQALDFQDLFNKISEIKGLSKEEKTDRIAQFFT
DLNTDGRFLTIGSNMWGLKRWYPVEQAEEEIQAPVKKKKKAAPKKKKAAAPVEEEEEDIE
EEEIEDDLDLDDEELDLDEDGEENSGLDGDYDLAEDEDTDPSYDDDEEKNLYDDDEEDDD
DDDEEEDKNEDL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgagctttaaaaactatagccacgacgagattgctgaaatgtctatgctagaaatcgcg
catgagatcttacttgacgaaaagcaagcgctggattttcaagacctattcaataaaatt
agcgagattaaaggactttccaaagaagagaaaacggatcgtattgctcaattctttacg
gatttaaatacagatggccgtttccttacgattggttccaacatgtggggactgaagcgt
tggtatcctgttgaacaagctgaagaagaaattcaagctcctgttaagaagaaaaagaaa
gctgctcctaagaagaaaaaagctgcagctcctgttgaagaagaagaggaagacatcgaa
gaagaagagatcgaagatgatcttgatctagatgacgaagaacttgacctcgacgaagac
ggggaagagaacagtggtttagatggagactacgatctagctgaagatgaagacacagat
ccaagctatgacgacgatgaggaaaagaatctctacgatgatgacgaagaagacgacgat
gatgatgatgaagaggaagacaaaaacgaagatttataa
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