Pontibacillus chungwhensis: QNI29_19885
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Entry
QNI29_19885 CDS
T09116
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pchu
Pontibacillus chungwhensis
Pathway
pchu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
QNI29_19885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchu03400
]
QNI29_19885
DNA repair and recombination proteins [BR:
pchu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
QNI29_19885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF2095
CDC24_OB3
Prok-RING_4
SpmSyn_N
GET2
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
WIF97958
LinkDB
All DBs
Position
complement(3915770..3916624)
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AA seq
284 aa
AA seq
DB search
MHTMWKGTISFGLVNIPVKLHSATENKDISLRQLHDECKSPIEYERTCPVCEREVEKEEI
VKAYEYAKNKFVVLDDEELEELKKEQSSKAVEIMDFVKLSDIDPIYFEKSYYLSPDEGGT
KAYSLLRQTLTDTEKIGVAKIIIRSKEQLAIVRVYENTLVMETIHYPDEVRDVKEVPNVP
EEMELGKKELETAKTLVEQLTSDFDPEQYKDDYRQALLDLIEAKKNNEDISTAEPKPTPD
NVTDLMEALEKSLDKNNKKTKKKSTKKKSAKTGNEQKSTSKKTS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatgtggaaagggacgattagttttggtctcgtgaatattccggtcaaactt
cattcagcaacagaaaataaagatattagcctgcgtcagcttcatgatgagtgcaaatca
ccgattgaatatgaacgtacatgcccggtgtgtgaacgtgaggtagagaaagaagaaatt
gtgaaggcgtatgaatatgcaaagaataagttcgttgtgttagatgacgaagaactagag
gaattaaagaaggagcagtcttctaaagcggttgagatcatggacttcgttaagttatca
gatatagatccgatttattttgagaaaagttattatctctctcctgatgaaggagggaca
aaggcttactctttactaaggcaaactcttacggatacagagaagattggggtagccaaa
attatcatacgatccaaagaacagctggcgattgtaagggtgtatgagaatacattagtg
atggagaccattcattatcctgatgaggtcagagacgtgaaggaagtaccgaatgtacct
gaagagatggagttagggaaaaaagaattagaaacagcgaagacacttgtagagcagcta
accagtgactttgatcctgaacaatataaggatgattaccgtcaagcgctccttgatcta
atcgaggcgaagaagaacaatgaagacatttctaccgctgagccaaagcctacgccggat
aatgtaacagacttaatggaggcactcgagaagtcgctcgataagaataataagaaaacg
aaaaagaaatcgacgaagaagaaatctgctaaaactgggaacgaacagaagtcaacgtca
aagaaaacatcctaa
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