Pontibacillus chungwhensis: QNI29_20380
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Entry
QNI29_20380 CDS
T09116
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pchu
Pontibacillus chungwhensis
Pathway
pchu03420
Nucleotide excision repair
pchu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QNI29_20380 (helD)
03430 Mismatch repair
QNI29_20380 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchu03400
]
QNI29_20380 (helD)
Enzymes [BR:
pchu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNI29_20380 (helD)
DNA repair and recombination proteins [BR:
pchu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QNI29_20380 (helD)
MMR (mismatch excision repair)
Other MMR factors
QNI29_20380 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
Viral_helicase1
AAA_19
SLFN-g3_helicase
AAA_16
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
WIF98051
LinkDB
All DBs
Position
complement(4022123..4024423)
Genome browser
AA seq
766 aa
AA seq
DB search
MDERQREQERVDKVVQEIEQKVEDIQEKAGDVKEEVIGLRETFWEDVTVNIDEPDDIMET
YNSLRQQAELLGERERSHKHVYDQLKTLKRMKSSPYFGRVDFTEARSQETDQVYIGISSL
MDRQDENFLVYDWRAPISSLYYDYSPGPAEYDTPEGTIEGTMDVKRQYIIRQGEIKGMFD
TGVTIGDELLQEVLGNQANTQMKSIVATIQKEQNQIIRYDQRPFLVVQGVAGSGKTSAAL
QRVAYLLYRYRTKITADQMMLFSPNPMFNSYVANVLPELGEENIAQTTFQEYMEDRLQTR
LQYEDAYDQLEYLLTAERNETYETRLEGVQYKATLQFKEDVDHYADSLAKKGLAFKNIKF
RGEIIVSKEEIENHFYTLDPFISIPNRLEEVVNWLLSEIEAMEKRERSKEWVEEEIELLG
KEEYLKIHQKLQAGYRGNAETFDDAVLEQKLLSKAIVKKYTKPIKRKIHDLQFLNMKTIY
KSLFQSRTGLSKEAANQTTDQLEHGTLFYEDVTPFLYLEDLIKGTHIYNHIRYLFIDEAQ
DYSPFQFAFLKKLFPYSRMTVLGDYNQAIYAHTLHAPNLLSEDLYEANRAEYLTLLRSYR
STRQIIEFTKQLIPGGESIQPFNREGVMPLLVSTATQEEHQHSLIKELYRLGEKKYETIA
IICKTAEESQKAYDVLVSKDIPVRLMDKDTYTFTKGIIVIPVYLAKGIEFDAVLLHDASD
ENYQFQLDRHLFYTACTRAMHELSLLTLGEPSRFIREISTDYYKYK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
gtggatgagcggcagcgagaacaagagcgggtagacaaagtggttcaagagattgaacag
aaagtagaggatatccaagagaaagcaggagatgtaaaagaagaggtcattggcctccgg
gaaacattctgggaagatgtaacggttaatattgatgagcctgatgatattatggaaact
tacaacagtctccgtcagcaggccgaactgttaggtgagcgagagcggagccataagcat
gtctatgatcaactaaaaacgctgaagcggatgaagagctctccttatttcgggcgggtg
gatttcacagaagcccgtagtcaggagacagatcaagtgtacatagggatctcttcttta
atggaccggcaggatgagaatttcctcgtctatgattggagagctccgatctctagcctt
tactacgattattctccgggacctgcagagtacgatacaccagaagggactattgagggg
actatggatgtgaaacgccaatacatcatacgccagggagaaattaaagggatgtttgat
accggtgtcacgataggggatgagctccttcaagaagtccttggaaaccaagctaatacc
caaatgaagagtatcgttgctaccattcagaaggagcagaaccaaattatccgatatgat
caacgcccctttttagttgttcagggtgttgccggtagcggaaagacatctgcagcgctt
caacgagtcgcttacctactctatcggtatcgaacgaagattacagcggatcaaatgatg
ctattttccccaaatccgatgtttaacagctatgtggctaatgtcctccctgaattagga
gaggaaaacattgcgcagaccacctttcaagaatatatggaagatcgcctgcaaacgagg
cttcaatacgaggatgcttatgatcagctagaatatttgctgacggcagaacgcaatgaa
acctatgaaacacgcttagaaggagtccaatataaggcgacgcttcaatttaaggaagat
gtagatcattatgcagattcccttgctaaaaagggattagcatttaaaaatattaaattc
cgaggagaaattatcgtctccaaagaggaaatagagaaccacttctataccctggatcct
tttatctccataccgaatcgtctggaggaggtagttaattggttactcagtgaaatcgaa
gctatggagaagagagaacgctctaaagaatgggtcgaggaagaaattgagttattggga
aaagaagaatacctaaaaattcatcaaaaattacaagcaggatacagaggcaatgccgaa
acatttgatgatgccgtactcgaacaaaaactgttatcaaaggcaatcgttaagaaatat
acaaaacccattaagcgaaaaattcatgatctgcagttcttgaacatgaaaacgatctat
aagtcactatttcaatcgagaactgggcttagcaaagaggccgcaaaccaaacaacggat
caattagaacatggcaccctgttctatgaggatgtgacgcctttcttatatttagaagac
cttattaaaggaacgcatatctataatcacattcgttatttatttatagatgaggcacaa
gattactccccgtttcagtttgcctttttgaaaaaactatttccttacagtcgtatgacg
gtgctcggagattataaccaagccatctatgctcatacgcttcatgcgccgaatcttctg
tctgaggacctttatgaagcaaatcgtgcagaatatttaacgcttcttcggagttatcgc
tctacacgccaaattatagagttcacaaaacaattgattccaggcggagagagcattcaa
cccttcaatcgtgaaggagtcatgccactacttgtgagcactgccactcaagaagaacat
caacattcgctcattaaagaattgtatcgccttggtgagaagaagtatgaaacgatcgct
attatttgtaagacggcagaggaaagtcaaaaagcttacgatgtcctggtatctaaagat
attcccgttcgtcttatggataaagacacgtacacgttcacaaaaggcataattgttatt
cctgtgtatttagcaaaaggaattgaatttgacgctgtccttctccatgatgcatccgat
gagaactaccagtttcaattagaccgtcatcttttctatacagcttgtacaagggctatg
catgaactatcgttactcactcttggtgaaccgagtcgatttattcgagaaatttctaca
gattattataagtataagtaa
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integrated database retrieval system
