Pseudomonas cichorii: PCH70_01460
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Entry
PCH70_01460 CDS
T03002
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pci
Pseudomonas cichorii
Pathway
pci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCH70_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_01460
Enzymes [BR:
pci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PCH70_01460
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PCH70_01460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AHF65299
LinkDB
All DBs
Position
complement(156516..157295)
Genome browser
AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLFPSGMNGDEDLN
QKFKLMDDFAKYMDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGTMGYVDALREVNREGDQYSWWPDSEQAEMLNLGWRFDYQILTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtaaatggcattcaggcggcagtcgagcgtggtttgctc
agttggctgcaagcgcagaatgccgacgtcatctgtctacaggacacccgcgcctccacc
tttgaactggatgatccggcttttcagctggatggctacttcctctatgcctgcgaagcc
gaagttcctgcccagggtggcgtggcgctgtattcgcggttgcaaccgaaggcggtaatc
agcggcctgggctttgaaacagccgaccgctacgggcgttacctgcaagcagatttcgat
aaagtcagtattgcaaccctgcttttcccgtcgggaatgaacggggacgaagacttgaat
cagaaattcaagctcatggacgacttcgccaagtacatggacaagcaacgccgcaagcgt
cgcgaatacatctactgtggctcgttctatgtggcgcagcagaagctcgacatcaagaac
tggcgtgacagccagcaatctcctggtttcctggcgccggaacgcgcctggatggacgag
attgtcggcaccatgggttatgtcgatgccctgcgcgaagtcaaccgcgaaggcgatcag
tacagctggtggcccgacagcgaacaggccgagatgctgaatctgggctggcgcttcgac
tatcagatcctgacaccgggcctgcgtcgtttcgtgcgcagtgcccgcttgccgcgtcag
ccacgcttctcgcagcatgcgccgctgatcgtggactacgactggaccctgacgatctga
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