Pseudomonas cichorii: PCH70_02040
Help
Entry
PCH70_02040 CDS
T03002
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pci
Pseudomonas cichorii
Pathway
pci00300
Lysine biosynthesis
pci00470
D-Amino acid metabolism
pci01100
Metabolic pathways
pci01110
Biosynthesis of secondary metabolites
pci01120
Microbial metabolism in diverse environments
pci01230
Biosynthesis of amino acids
Module
pci_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PCH70_02040
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PCH70_02040
Enzymes [BR:
pci01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PCH70_02040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AHF65357
LinkDB
All DBs
Position
complement(205626..206456)
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRNDGQISVDM
GPPRLAPQDIPFTAPAQALSYNVDVDGQNVELAAVSMGNPHAVLRVDDINGAPVHELGPK
IEHHPRFPARVNVGFLHVIDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGHSVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcatgggttgggtaatgacttcatggtcctggaccta
gtgagtcagcacgcgcatattttgcccaagcacgccaaacaatggggcgaccggcatacc
ggcatcggtttcgaccagttgctgatcgtcgaagcgcccagcaatccggacgtggatttc
cgttaccggattttcaactccgacggttccgaagtggagcagtgtggcaacggtgcccgc
tgcttcgcccgcttcgtgctggacaagcgcctgacggccaagcgccagatccgggtcgaa
accaagagcggcatcatcgagctggatgtgcgcaacgacgggcagatcagcgtcgacatg
ggtccgccacgcctggccccacaggatattccgttcacggcccccgctcaggcactgagc
tacaacgtcgatgtcgacggccagaacgtcgagctggctgcggtgtccatgggcaatccc
catgcggtcctgcgggtagacgacatcaacggcgcgccggtgcatgaactgggtccgaaa
atcgagcatcacccgcgcttcccggcacgggtcaatgtgggctttcttcacgtcatcgat
cgccagcgcgcacaattgcgcgtctgggagcgcggcgcaggtgaaacccaggcctgcggc
accggcgcatgtgctgcagccgtagcggccatcagccagggctggatggattcgcctctg
ttgatcgatctgcccggcggacgcctgtccatcgagtgggcaggtccggggcattctgtg
atgatgacaggcccggcagtacgggtttacgaaggccaagttcgtctatga
DBGET
integrated database retrieval system