Pseudomonas cichorii: PCH70_02050
Help
Entry
PCH70_02050 CDS
T03002
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pci
Pseudomonas cichorii
Pathway
pci00300
Lysine biosynthesis
pci00470
D-Amino acid metabolism
pci01100
Metabolic pathways
pci01110
Biosynthesis of secondary metabolites
pci01120
Microbial metabolism in diverse environments
pci01230
Biosynthesis of amino acids
Module
pci_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PCH70_02050
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PCH70_02050
Enzymes [BR:
pci01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PCH70_02050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHF65358
LinkDB
All DBs
Position
complement(206461..207708)
Genome browser
AA seq
415 aa
AA seq
DB search
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELNVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRASQLPNLEVLGVDCHIGSQLTTLEPFIDALDRLLDLVDRLGDCGIHLRHIDLGGGL
GVRYRDEEPPLAANYIKAVRERLAGRDLGLMFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDGAARTYDIVGPICETGDFLAKSRELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGSQAFEVRRRETVTELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcaactaccgcgacggtgagctgttcgcggaaggagtagccctgtctgcc
attgccgagcgtttcggcacgccgacctatgtctactcccgcgctcatatcgaagcgcaa
taccgtgcctacgccgacgccctgagcggcatgcctcatctggtgtgcttcgccgtaaaa
gccaactccaacctgggcgtactcaatgtcctggcgcgtctgggcgccggtttcgacatc
gtgtcccgtggcgaactggagcgtgtgctggcagccggcggcaaagccgacaagatcgta
ttctccggcgtcggcaagacccgagacgacatgcgccgcgcccttgaagtcggcgtgcat
tgcttcaacgtcgagtccactgacgaactcgaacgccttcaagtcgtggcggccgagctg
aatgtccgtgcgccgatctccctgcgcgtcaacccggacgtggatgcaggcactcacccg
tacatttccacaggccttaaagagaacaagttcggcatcgccatcgcggatgccgaagac
gtctacgttcgcgcctcgcagttgccgaacctggaagtcctgggtgtcgactgccatatc
ggctcgcaactgacgaccctggaacccttcatcgatgcactggatcgcctgctggatctg
gtggatcgtcttggcgattgcggcattcacttgcgtcatatcgatctgggtggcggcctg
ggcgtgcgttatcgcgacgaagagccaccattggcggccaactacatcaaggccgtgcgc
gagcgccttgccggtcgcgacctggggctgatgttcgagccgggccgcttcatcgtggcc
aatgccggcgtgctgctgactcaggtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgatgcggccatgaacgacctgatccgtccggcgctgtatcaggcctggatg
gatgtcacagccgtgcgcccacgtgatggcgcagcacgcacttatgacatcgtcggcccg
atctgcgaaaccggtgattttctggccaagagccgcgaactggctctggctgaaggcgat
ttgctggctgttcactcggccggcgcctatggttttgtcatgagttcgaactacaacacg
cgcggccgtgctgccgaagtgttggtcgatggttcacaagcctttgaagtgcgtcgtcgc
gaaaccgtgaccgagctgttcgctggcgaaagcctgctgccggagtaa
DBGET
integrated database retrieval system