Pseudomonas cichorii: PCH70_03520
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Entry
PCH70_03520 CDS
T03002
Name
(GenBank) LacI family transcription regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pci03000
]
PCH70_03520
Transcription factors [BR:
pci03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PCH70_03520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_31
HTH_3
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AHF65505
LinkDB
All DBs
Position
complement(362672..363718)
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AA seq
348 aa
AA seq
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MADDIPATRKRRGAGRVTITGVAKQAGVSAITVSRYFNQPDQVSPELRERIAAAVNQLGY
VPNLVAGGLASARSRVVAMVIPNISGPIFANTIQGFSDTLSKHGFQLLLASSYFSTEQEE
SAVRAFLGWSPAALVLTSRFHSAATEKMIEQADIPVIETWDHQPGRSPIQIGFSHYDVGV
SATRYLHGKGYRRIAFVQNSMAGDFSALERRDGYIATLETFGLKPRVFVPAEGMAPFEAG
KQAMDTLMNGPDKPDAIFFANDNLAAGGLLASQRAGLQIPKDCAVMGFGDYAFAQMMMPS
LSTIKPPALEIGVLAAQRVLESLGVLPLEGEIQRLNLLDCSLVEREST
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgacatccctgcgacacgcaaacgccgaggcgcaggccgcgtgaccatcaca
ggcgtggcaaagcaggcaggtgtttcggccattaccgtgtcgcgttatttcaaccagccg
gatcaggtttcccccgaactgcgcgaacgcatcgccgcagcggtcaatcaactgggctat
gtacccaatctggtggcaggaggtctggcatcggcacgcagccgggtcgtagccatggtg
attcccaacatctcgggtccgatcttcgccaatacaatccagggtttcagtgacaccttg
agcaagcacggcttccagttgctgctggcctccagctacttctccaccgaacaggaagaa
agcgcggtaagggcatttctgggttggtcaccggcagcgctggtgctgaccagtcgcttt
cacagtgctgccacggagaaaatgatcgagcaggcggatatcccggtgatcgaaacctgg
gaccaccagccaggccgcagcccgatccagatcgggttctcgcattacgacgtgggcgtc
agcgctacccgctatctgcatggcaaaggctaccgacgcatcgccttcgtgcagaacagc
atggcaggtgacttcagcgcccttgaacgccgtgacggctacatcgccacattggaaacc
ttcggcctcaagccaagggtgttcgtcccggcggaaggaatggcccctttcgaggctggc
aaacaggcgatggatacactcatgaacggcccggacaaacccgacgccatcttcttcgcc
aacgacaacctggccgccggtggattgctcgccagccagcgtgcaggcctgcaaatacca
aaggactgcgccgtcatgggatttggcgactacgccttcgcgcaaatgatgatgccgagc
ctcagcaccatcaaaccacccgctctggaaatcggcgtcctggctgcacagcgcgtactg
gaaagcctcggcgtactgccgctggaaggggaaatacagcgactgaacctgctcgattgc
agcctggttgagcgggaaagtacgtga
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