Pseudomonas cichorii: PCH70_03740
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Entry
PCH70_03740 CDS
T03002
Name
(GenBank) MutM protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pci
Pseudomonas cichorii
Pathway
pci03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCH70_03740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_03740
Enzymes [BR:
pci01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PCH70_03740
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PCH70_03740
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PCH70_03740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
AHF65527
LinkDB
All DBs
Position
390308..391120
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGIAPHLEGQRVSRVIVRDRRLRWPIPEDLDVRLSGQRIVEVGRRAKYL
LIQAEVGTLISHLGMSGNLRLVEAGLPALKHEHVDIELESGLALRYTDPRRFGAMLWSLE
PHSHELLVRLGPEPLTDLFDGERLYERSRGKSIAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAKGISRARYLKLAVEIKRILAYAIERGGTTLRDFIGGDGKPGYFQQELFVYGR
GEQPCKVCGTTLREVKLGQRASVYCPKCQT
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtcgaaaccacgcgccgtggcattgcgccccatctggaaggg
cagcgtgtcagccgcgtgatcgtgcgggaccggcgtttgcgctggcccatccccgaagac
ctcgatgtacgcctttccgggcagcgtatcgtggaagtcggccgacgggccaaatacctg
ctgatccaggccgaagtcggaacgctcatcagccatctggggatgtcaggtaacctgcga
ctggtcgaagctggcctgcctgcgctcaagcatgagcatgtggatatcgaactggagtcc
ggtctggcgttgcgctataccgatccgcgccgtttcggtgccatgctctggagccttgag
ccccacagccacgagcttctggttcgactggggccggagccactgacggatctgttcgac
ggtgagcgcctgtacgagcgctcccgaggcaagtccatcgcggtgaagcctttcatcatg
gataacgcggtggtggtcggcgtgggcaatatttatgcgaccgaagcgctgtttgctgcc
ggtatcgacccgcgacgcgaggccaagggcatttcccgggcgcgctatctgaagctggct
gtcgagatcaagcgcatcctggcctacgccatcgaacgcggcggcacgaccttgcgcgac
ttcatcggtggtgacggcaaacctggctatttccagcaggagctttttgtctacggccgt
ggtgagcagccatgcaaggtgtgcggcacgaccttgcgtgaggtcaagctggggcagcgg
gcaagcgtttactgccccaaatgccagacctga
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