Pseudomonas cichorii: PCH70_04570
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Entry
PCH70_04570 CDS
T03002
Name
(GenBank) GlyA protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pci
Pseudomonas cichorii
Pathway
pci00260
Glycine, serine and threonine metabolism
pci00460
Cyanoamino acid metabolism
pci00630
Glyoxylate and dicarboxylate metabolism
pci00670
One carbon pool by folate
pci00680
Methane metabolism
pci01100
Metabolic pathways
pci01110
Biosynthesis of secondary metabolites
pci01120
Microbial metabolism in diverse environments
pci01200
Carbon metabolism
pci01230
Biosynthesis of amino acids
pci01240
Biosynthesis of cofactors
pci04981
Folate transport and metabolism
Module
pci_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PCH70_04570
09102 Energy metabolism
00680 Methane metabolism
PCH70_04570
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PCH70_04570
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PCH70_04570
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PCH70_04570
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PCH70_04570
Enzymes [BR:
pci01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PCH70_04570
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AHF65610
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Position
489260..490513
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAINAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIERAKLLFGADYANVQPHSGSQANAAVYLALLQAGDTVLGMS
LAHGGHLTHGAKVSFSGRLYNAVQYGIDTNTGLIDYDEVERIALETKPKMIIAGFSAYSK
TLDFPRFREIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEDLEKKLNSAVFPGGQGGPLMHVIAAKAVCFKEALEPGFKAYQQQVIDNAQAMAQ
VFVDRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNSVPNDPQSPFVTS
GLRIGTPAVTSRGFKVTQCTDLAGWICDILDNLGDADVEANVASQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggatatgacgatgcactgttggctgcgatcaat
gccgaggagcagcgccaggaagaccatatcgagctgatcgcctccgaaaactacaccagc
aagcgtgtgatgcaggctcagggcagcggactgaccaacaaatatgccgaaggctatccg
ggcaagcgttattacggtggctgcgagcatgtcgataaagtcgagcaactggcaatcgag
cgggccaagctgctgtttggtgccgattacgccaacgtccagccccactccggcagccag
gccaacgccgctgtctatctggctctgctgcaagcgggcgataccgtgctgggcatgagc
ctggcccatggcggtcacctgacccacggtgccaaggtgagtttctccggtcgcctttat
aacgctgtgcaatacggcatcgacaccaataccgggctgatcgactacgacgaagtcgag
cgtatcgccctggaaaccaagccgaagatgatcattgccggtttctcggcctactcgaaa
accctggattttccgcgcttccgtgaaattgccgacaaggtgggcgcttacctgttcgtc
gacatggcccacgtggccgggctggtggctgccggtttgtatccgaacccgctgccttat
gccgatgtggtgaccaccaccacccacaagaccctgcgtggtccgcgtggtggcctgatc
ctggccaaggccaacgaagaccttgagaaaaaactcaactccgccgtattccccggtggg
cagggcggcccgttgatgcacgtcatcgccgccaaggccgtgtgcttcaaggaagcgctg
gagccaggtttcaaggcttatcaacaacaagtgatcgacaacgcccaggccatggcgcag
gtcttcgtggatcgcggttacgacgtggtgtccggcggtaccgacaaccacctgttcctg
gtcagcctgattcgtcagggcctgaccggcaaggatgcggacgccgctctgggccgtgcg
cacatcaccgtcaacaagaactcggtaccgaacgacccgcaatcgccgttcgtgacttcg
ggcctgcggatcggcaccccggccgtcaccagtcgcggtttcaaggtgacccaatgtacc
gatctggccggctggatctgcgacattctcgacaacctcggtgatgccgatgtcgaggcc
aacgttgccagtcaggtcgcagcactgtgcgccgatttcccggtttatcgctga
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