Pseudomonas cichorii: PCH70_05210
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Entry
PCH70_05210 CDS
T03002
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pci
Pseudomonas cichorii
Pathway
pci02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PCH70_05210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_05210
Enzymes [BR:
pci01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PCH70_05210
Transporters [BR:
pci02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PCH70_05210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
nSTAND3
AAA_22
AAA_16
AAA_29
RsgA_GTPase
AAA_30
ABC_ATPase
NB-ARC
nSTAND1
MMR_HSR1
APS_kinase
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHF65674
LinkDB
All DBs
Position
567214..569001
Genome browser
AA seq
595 aa
AA seq
DB search
MASSTQQSSMKIYLRLLKYVVPYWRSFAVSIIGFLLFASSQPMLADMLKHFLNALQEPDG
SKFLGVSLILGVPLLIVLIAVYQGIGSFLGNYYLAKVARGVVHDLRCSLFDNLLTLPNRY
FDNHNSGHLISRITYNVTMVTGAATDAIKVVIREGFTVVFLIGYLLYSNWKMTLVMLAIL
PIIAVMVSSASKKFRKQSKKIQEAMGDVTHVASEAIQGYRVVRSFGGETYEKQRFQDASA
SNMNRSLGMTRTQSIYTPMLQLVIYVAMAILMYLVLYMRGDASAGELIAYITAAGLLPKP
IRQLSEVSATIQKGLAAAENIFEQLDEEPEVDSGTCEQEHVSGRLEVRNLTFAYPNVETP
VLKDISFTAEPGQMVALVGRSGSGKSTLANLIPRFYHHSEGQILLDGVDVEDYKLNNLRQ
HIALVNQQVTLFNDTVTNNIAYGDLAGAPIEDVQKAAEAAYAAEFIVQMPQGYETLVGEN
GVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDEVVKGRTTLVIAH
RLTTIEKADLILVMDRGQIVERGTHEQLLALNGYYARLHEKDFKEESEGVTGGAL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggccagttctacccagcagtcaagcatgaaaatctatctgagattgttgaaatacgtg
gtcccctactggaggtcgtttgccgtaagtatcatcggctttcttttgtttgcctccagt
cagcccatgctggccgacatgctcaaacactttctcaatgccctgcaggagccggatggc
agcaaatttcttggcgtgtcgctgattctcggggtaccgctgctgattgtactcattgcg
gtctaccaaggcataggctcatttttgggtaactattacctggcaaaagtggctcgcggc
gtcgttcatgacctgcgttgctccttgttcgacaacctgctgactctgccaaaccgttat
ttcgataaccataattcgggccatttgatttcacgtatcacctacaacgtgaccatggtc
acaggtgcggccaccgatgcaatcaaagtggtgattcgtgaagggttcacggttgtattc
ctgatcggttacctgctgtacagcaactggaaaatgaccctcgtcatgctggccatcctg
ccgatcatcgcggtcatggtcagcagcgccagcaagaaatttcgcaagcaaagcaagaaa
atccaggaagcgatgggcgacgttacccatgtcgcttcagaggcgattcaggggtatcgg
gttgtacgcagtttcggtggagaaacctacgagaagcagcgttttcaggatgccagcgcc
agcaacatgaaccgcagcctcggcatgacccgcacgcagtccatctacacgcccatgttg
cagttggtcatttatgtggcgatggcgattctgatgtatctggtgctgtacatgcgtggc
gatgcttctgctggtgaactgatcgcttacatcactgcggcaggcttgctgccaaagccg
attcgtcagctttcggaagtgagtgcgaccatccagaaaggcttggcggctgccgaaaac
attttcgagcaactggacgaagagcctgaagtggacagcggcacatgcgaacaggaacat
gtttccggtcgtctggaagtgcgtaacctgacgttcgcctacccgaatgtcgaaacgcct
gtactcaaggatatttccttcactgccgagccggggcagatggtcgcgctggtggggcgc
tcgggtagcgggaaatccacactggccaacctgattccgcgtttctatcaccacagcgaa
gggcagatccttcttgatggtgtcgatgtcgaagattacaaactgaacaatctgcgccag
cacatcgcgctggtgaaccagcaggtcaccttgttcaacgataccgtcaccaacaacatc
gcctacggtgatcttgccggtgcgcccatcgaagatgtgcaaaaggccgccgaagccgcc
tatgccgccgagttcatcgtacagatgcctcagggctacgagacgctggtgggcgagaac
ggtgtcctgctttccggcgggcagcgtcagcgtctggcgattgctcgtgcgttgctcaag
aatgcgccactgctgatcctcgacgaagcgacctcggctctcgataccgaatccgagcgc
catatccaggctgcactggatgaagtggtcaaggggcgcacgacactggtcattgctcac
cgcctgacgaccattgaaaaggccgatctgatcctggtcatggaccgtgggcagattgtc
gagcgcggtacccatgagcaattgcttgctctcaatggttactacgcacgtcttcacgag
aaggatttcaaggaagaaagcgagggcgttacaggaggcgccctttga
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