Pseudomonas cichorii: PCH70_05520
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Entry
PCH70_05520 CDS
T03002
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pci
Pseudomonas cichorii
Pathway
pci03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PCH70_05520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pci03019
]
PCH70_05520
03009 Ribosome biogenesis [BR:
pci03009
]
PCH70_05520
Messenger RNA biogenesis [BR:
pci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PCH70_05520
Ribosome biogenesis [BR:
pci03009
]
Eukaryotic type
Pre-60S particles
RNases
PCH70_05520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AHF65705
LinkDB
All DBs
Position
603354..603887
Genome browser
AA seq
177 aa
AA seq
DB search
MQNKQNLIWIDLEMTGLDPDTDVIIEMATIITDSELNTLAEGPVIAIHQSDETLAGMDEW
NTRQHGGSGLTQRVRESTISMAEAEAQTLDFIKQWVPERSSPICGNSICQDRRFLYRHMS
ALENYFHYRNLDVSTLKELAARWSPELRFKKGNTHLALDDIRESIAELRFYREHFIK
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaagcaaaacctgatctggatcgatctggaaatgaccggcctggacccggac
accgatgtcatcatcgaaatggccacgatcatcaccgacagtgagctcaatacgctggcc
gaagggccggtgatcgccattcaccagagcgacgaaacgctggccgggatggacgagtgg
aatacccgtcaacatggcggctcgggcctgacccagcgggttcgcgaaagcaccatcagc
atggctgaagccgaggctcagaccctggacttcatcaaacagtgggtaccggagcgcagc
tcgccgatctgtggcaacagcatttgccaggatcgccgcttcctgtatcgacacatgtcg
gcactggaaaactatttccactaccgcaacctcgatgtttccaccctcaaggaactggct
gcccgctggtcgccggagttgcgcttcaagaaaggcaacacccatcttgcgctggacgac
attcgggagtcgattgccgagctgcgtttctaccgcgagcatttcatcaagtaa
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