Pseudomonas cichorii: PCH70_06250
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Entry
PCH70_06250 CDS
T03002
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding subunit
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pci
Pseudomonas cichorii
Pathway
pci02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCH70_06250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_06250
Transporters [BR:
pci02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PCH70_06250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
AAA_25
nSTAND_NTPase5
nSTAND3
AAA_22
TOBE
FeoB_N
AAA_29
Rad17
Myosin_N
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AHF65778
LinkDB
All DBs
Position
692487..693611
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AA seq
374 aa
AA seq
DB search
MSDVDSSAGANDVLVSFRGVQKSYDGEALIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMM
LAGFETPTAGEILLGGRAINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKS
EIGDKVKRALGMVQLDAFAHRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQL
REHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNT
FVANFIGENNRLNGRLVSQTGDRCVVELERGEKVEALAINVGQAGEPVTLSIRPERISLN
GRSESCVNRFSGRVAEFIYLGDHVRVRLEVAGKTDFFVKQPIAELDAALSVGDVVPLGWQ
VEHARALDPLQQVH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtcgattcaagcgctggggcaaatgatgttctggtcagctttcgtggtgtg
cagaagagctacgacggcgaagcactcatcgtcaaagaccttaacctggacattcgcaaa
ggcgaattcctcaccctgctcgggccatcgggctccggcaagaccaccagtctgatgatg
ctggccggtttcgagacgccgaccgcgggcgaaatcctgctgggtggccgcgccattaac
aacgtgccgccccacaagcgcgacattggcatggtgttccagaactacgcactgttcccg
cacatgacggtcgccgagaacctggcgttcccgctgtcggtgcgcggcatgagcaagagc
gagatcggcgacaaggtcaagcgcgcactgggcatggttcaactggatgccttcgcgcat
cgctacccggcgcagttgtccggtggtcagcagcagcgtgtggccttggcccgcgcgctg
gttttcgagccgcaactggtgctgatggacgaacccctcggcgcactcgacaagcaactg
cgcgaacacatgcagatggagatcaaacatctgcaccagcgtctgggcgtgaccgtggtc
tacgtgacccacgaccagggcgaagccctgaccatgtccgatcgcgttgccgtgttccat
cagggcgagatccagcagatcgccccgccgcgtaccctttatgaagaacccaagaacacc
ttcgtcgccaacttcattggcgagaacaaccgtctcaacgggcgcttggtcagccagacc
ggtgaccgctgcgtcgtcgagctggaacggggagagaaggtcgaggcactggcaatcaat
gtcggccaggccggcgagccggtcaccctctcgatccgtccggaacgcatcagcctcaat
ggccgtagcgaaagttgtgtaaaccgtttctcgggccgtgttgccgagttcatctatctg
ggcgaccacgttcgtgtgcgtctggaggtggcaggcaagaccgactttttcgtcaagcag
cctatcgccgaactggatgcggccttgagcgttggcgatgtcgtgccccttggatggcaa
gtcgagcacgctcgcgcgctcgatcccttgcagcaagtgcattga
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