Pseudomonas cichorii: PCH70_06650
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Entry
PCH70_06650 CDS
T03002
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pci03000
]
PCH70_06650
Transcription factors [BR:
pci03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PCH70_06650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AHF65818
LinkDB
All DBs
Position
complement(731462..732382)
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AA seq
306 aa
AA seq
DB search
MSIRRPDPLAQVSDFDIRLLRIFKSVVEAGGFSAAESVLGIGRSAISQQMSDLEQRLGLR
LCQRGRAGFSVTDEGREVYQSSLQLLSALESFRTEVNGLHQHLRGELNIGVTDNLVTLPH
MRITNALSQLKERGPDVHINIRMLSPSEVEQGVLDGSLHVGVVPQTNALPGLEYQPLYSE
RSLLYCAVGHPLFYVNDAELEDERIAAQEAIAPTFRLPVDIQAHYQALRCTASASDREGM
AFLILTGRYIGYLPDHYANVWLQQGRLRTLKPDSRFYDLSLVSVTRKGRRPHLVLESFLE
SLAATR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcgccgccccgatcccttggcacaagtcagcgacttcgatatccgtctgctg
cgcatcttcaaaagcgtagtcgaagccggtggtttctcggcagcagaaagcgtgctcggc
attggccgttcggccataagccagcaaatgagcgacctggaacagcgcctgggtttacgc
ctgtgccagcgaggacgagccggtttctcggtgacggatgagggccgcgaggtctatcag
tcgtcgttgcagttactcagcgcacttgagagttttcgcaccgaggtcaacggcctgcac
cagcacctgcgcggagagctgaatatcggcgtgacagataacctggtgacgctaccgcac
atgcgcatcaccaatgccctgtcgcaattgaaggaacgcggcccggacgtgcatatcaac
atccgcatgctctccccctcggaagtggagcaaggcgtgctcgatggcagcctgcatgtc
ggcgtcgttccgcagaccaatgctctgccaggcctcgagtaccagcctttatatagcgaa
cgctccctgctgtactgcgcggtcggccaccctctgttttacgtgaatgatgcagaactc
gaagatgagcgcattgcagcccaggaagccatcgcccccacctttcgattgccggtcgat
attcaggctcactatcaggcactcaggtgcaccgccagcgcttcggatcgcgaaggcatg
gcctttctgatcctgaccggtcgctatataggctatctgccggatcactacgccaatgtc
tggctccagcaaggcaggctgcgcaccttgaaaccggactcacggttttacgatctgagc
ctggtctccgtcacccgcaaaggccgtcgccctcatttggtgctggagagctttctggag
agcctggctgctacgcgataa
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