Pseudomonas cichorii: PCH70_07860
Help
Entry
PCH70_07860 CDS
T03002
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pci03021
]
PCH70_07860
03009 Ribosome biogenesis [BR:
pci03009
]
PCH70_07860
Transcription machinery [BR:
pci03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PCH70_07860
Ribosome biogenesis [BR:
pci03009
]
Prokaryotic type
rRNA transcription factors
PCH70_07860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
RNA_pol_A_CTD
KH_2
Motif
Other DBs
NCBI-ProteinID:
AHF65939
LinkDB
All DBs
Position
870486..871967
Genome browser
AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPAGVIFEALELALATATKKRFEDEVELRVEINRHTGNYETFR
RWNVVEDEDLDDPAYELAVDQAQARKPGAVAGDLIEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIDELEVDEDLAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEETVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtgtccaatgaaaagggcgttccggca
ggagtgatttttgaagcgctggagctggctcttgccactgctaccaagaagcgttttgaa
gatgaggttgagctgcgtgtggaaatcaaccgccacaccggtaactacgagactttccgt
cgctggaatgtggtcgaagacgaagatctggacgatccggcctacgagctggctgtagac
caggcccaggccagaaagccgggtgctgtcgctggcgatctgatcgaagagaagatcgag
tccatcgaattcggtcgtattgctgcgcagaccgccaagcaagtcattgtgcagaaggtt
cgtgaagccgagcgtgctcaggtggtcgatgcctatcgcgagcgtcttggcgaaatcatt
tccggtacagttaaaaaggttacgcgtgacaatgtcatcgttgacctgggtaacaatgcc
gaagcattgctggctcgtgaagacatcatctcccgtgagactttccgggtaggtgtgcgt
ctgcgggctttgctgaaagaaatccgcactgaaaaccgcggccctcagctgattctgtcg
cgtactgcgccagaaatgctgatcgagcttttccgtatcgaagtaccggaaattgccgaa
ggtctgatcgaggtgatggctgcctcccgtgacccgggttcgcgtgcaaaaatcgctgtt
cgctccaaggacaaacgaatcgacccgcaaggcgcctgcatcggcatgcgcggttcgcgt
gttcaggccgtatccggcgagttgggtggcgagcgtgtggatatcgtgctctgggacgat
aacccggcacagttcgtgatcaacgcaatgtcccctgctgaagtggctgcaatcatcgtc
gatgaagatgcccatgcaatggatatcgctgttggtgcggacaacctggctcaggccatt
ggtcgtggcggtcagaacgtgcgtctggcaagtcagttgactggctggaccctgaacgtg
atgaccgaatcggacatccaggccaagcagcaggcagagactggcgacattctgcgcaac
ttcatcgacgagctggaagtcgacgaagatctggcgcaggtgctggtcgatgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgatggcttt
gacgaagaaaccgtcaacgagcttcgcgctcgtgccaaggatcgcttgttgactaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctatagatgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccattggttcgagtaa
DBGET
integrated database retrieval system
