KEGG   Pseudomonas cichorii: PCH70_09630
Entry
PCH70_09630       CDS       T03002                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pci  Pseudomonas cichorii
Pathway
pci02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pci00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PCH70_09630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pci03021]
    PCH70_09630
Transcription machinery [BR:pci03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PCH70_09630
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like Sigma70_ECF HTH_23 HTH_28 GerE HTH_7 HTH_11
Other DBs
NCBI-ProteinID: AHF66116
LinkDB
Position
1063176..1063724
AA seq 182 aa
MRDFSAADDDLVPDRRQQMTELYSDHHLWLQNWLRKKIGCSQRAADLAQDAFVRILMLAE
PLNLKEPRAFLATTATRLLIDGTRRRKIERAYLDALTLHADEACTPNPEAIHVALQMLER
IAQMLDGLPPRPRQAFLLHRLEGMTYSEIAIQLDVSSSMVKQYMASVMVHCYKTLHGSGH
LS
NT seq 549 nt   +upstreamnt  +downstreamnt
atgcgcgacttttccgcagctgatgacgaccttgtgcctgatcgtcggcagcaaatgacc
gagctctacagtgaccaccatctgtggctgcaaaactggctgcgaaaaaagattgggtgc
tcgcaacgtgctgcggatctggcccaggacgctttcgtgcgtatcctgatgctggccgaa
ccgctcaatctcaaggagcctcgggcgtttcttgccaccactgcgacgcgcttgctgatc
gatggcacccggcgtcgcaagatcgagcgcgcctacctggatgcgctgacgctgcatgcc
gacgaggcttgtacgccgaatcccgaagccattcatgtcgcgctgcagatgctggagcga
atcgcgcagatgcttgacggcttgcctcccaggccgcgtcaggcatttttgctgcaccgc
cttgaggggatgacttacagcgaaatagccattcaattggatgtgtcctccagcatggtc
aaacaatacatggccagcgtgatggtgcattgctacaagacactgcacggttcgggccat
ctctcgtga

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