Pseudomonas cichorii: PCH70_09630
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Entry
PCH70_09630 CDS
T03002
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pci
Pseudomonas cichorii
Pathway
pci02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PCH70_09630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pci03021
]
PCH70_09630
Transcription machinery [BR:
pci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCH70_09630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
HTH_28
GerE
HTH_7
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AHF66116
LinkDB
All DBs
Position
1063176..1063724
Genome browser
AA seq
182 aa
AA seq
DB search
MRDFSAADDDLVPDRRQQMTELYSDHHLWLQNWLRKKIGCSQRAADLAQDAFVRILMLAE
PLNLKEPRAFLATTATRLLIDGTRRRKIERAYLDALTLHADEACTPNPEAIHVALQMLER
IAQMLDGLPPRPRQAFLLHRLEGMTYSEIAIQLDVSSSMVKQYMASVMVHCYKTLHGSGH
LS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacttttccgcagctgatgacgaccttgtgcctgatcgtcggcagcaaatgacc
gagctctacagtgaccaccatctgtggctgcaaaactggctgcgaaaaaagattgggtgc
tcgcaacgtgctgcggatctggcccaggacgctttcgtgcgtatcctgatgctggccgaa
ccgctcaatctcaaggagcctcgggcgtttcttgccaccactgcgacgcgcttgctgatc
gatggcacccggcgtcgcaagatcgagcgcgcctacctggatgcgctgacgctgcatgcc
gacgaggcttgtacgccgaatcccgaagccattcatgtcgcgctgcagatgctggagcga
atcgcgcagatgcttgacggcttgcctcccaggccgcgtcaggcatttttgctgcaccgc
cttgaggggatgacttacagcgaaatagccattcaattggatgtgtcctccagcatggtc
aaacaatacatggccagcgtgatggtgcattgctacaagacactgcacggttcgggccat
ctctcgtga
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