Pseudomonas cichorii: PCH70_10680
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Entry
PCH70_10680 CDS
T03002
Name
(GenBank) DNA-binding transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pci03000
]
PCH70_10680
Transcription factors [BR:
pci03000
]
Prokaryotic type
Helix-turn-helix
Other families
PCH70_10680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_31
RWP-RK
HTH_24
HTH_AsnC-type
CHRD
Motif
Other DBs
NCBI-ProteinID:
AHF66221
LinkDB
All DBs
Position
complement(1193837..1194703)
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AA seq
288 aa
AA seq
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MDRAKNLLEQIQVRLEELNKAERKVAEVILLNPQMATRLSIAALAQAAKVSEPTVNRFCR
SFNVSGYPELKLQLAQSLASGAAYVSRAVEADDNPEAYTQKIFGSAIASLDSACQQLDPT
LISKSVDMLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVTAHADVLMQRMIASVAHTG
ELFVIISYTGRTRELVEVARIARANGASVLGLTAAGSPLAKASTVSLNIPLPEDTDIYMP
MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNDSRYPAEDQG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgcaaaaaatctcctggagcagatccaggtccggctcgaagagctgaacaag
gctgaacgcaaggtcgccgaggtgatcctgctcaacccgcagatggccacgcggctcagc
atcgcggccctcgcccaggcggcgaaagtcagcgagccgacggtcaatcgcttttgccgt
tcgttcaacgtcagcggttaccccgagctgaaactgcaactggcacaaagcctggccagc
ggtgcggcctatgtcagccgggcagtggaagccgacgacaatcccgaggcctacacccag
aagattttcggcagcgccatcgcgtcactggacagcgcctgccagcaactggacccgacc
ctgatcagcaagtcggtggacatgctcatccaggcccgccagatccacttcttcggcctg
ggtgcatcggcacccgtggcgctggatgcccagcacaagttcttccgcttcaacctggca
gttaccgcccatgcggacgtgctgatgcagcgcatgatcgcctcggtggcgcataccggt
gagttgttcgtgatcatttcctacaccggacgcacccgtgagctggtggaagtggcacgc
attgcacgggccaacggtgcctcggtactgggtctcactgctgcgggctctcccctggcc
aaggccagcaccgtgagcctgaatattccgctgcctgaagacaccgacatctacatgccg
atgacgtcccggatcatccagctgaccgtcctcgacgtactggccacgggcatgacattg
cgccgcggcgtggacttccagccacacctgcgcaagatcaaggaaagcctgaatgacagc
cggtatccggcggaagatcagggctga
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