Pseudomonas cichorii: PCH70_12310
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Entry
PCH70_12310 CDS
T03002
Name
(GenBank) putative lipoprotein
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
pci
Pseudomonas cichorii
Module
pci_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_12310
01504 Antimicrobial resistance genes [BR:
pci01504
]
PCH70_12310
Transporters [BR:
pci02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PCH70_12310
Antimicrobial resistance genes [BR:
pci01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PCH70_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
FliJ
FPP
CusB_dom_1
Qn_am_d_aII
FapA
OEP
Motif
Other DBs
NCBI-ProteinID:
AHF66384
LinkDB
All DBs
Position
1372673..1373773
Genome browser
AA seq
366 aa
AA seq
DB search
MFRDALSLVVPVCLLSLLTACSQEVAAPVVVRPAMVAQPLLSSQSVDSYPGEVRARFEPE
LAFRIGGKVSKRLVEVGQRVKADQPLAELDAEDVRLQLEATRAQVAAAEANLNLVRSERD
RYKTLLDRQMVSRSQYDNAENLYRSGEARLKQIKAELTVADNQTRYTVLRASQDGVIAGR
SVEVGQVVAAGQTVFTLAADGEREVLISLPEQNFARFKVGQPVSVELWTVRDQRFAGRIR
ELSPAADPRSRTFAARIAFATGQVPVELGQSARVFIAAEHAVPLSVPLSAVSSENGASYV
WRVSPDGILKRAPVQLGAYGQESVPVLEGLKETDWIVAAGVHVLREGERIRPVDRSNRAV
KMAAGE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcgatgctttgtctctcgtcgtgccggtttgtctgctgtcattgctcacagcc
tgcagtcaggaagtggctgcgcctgtagtggtgcgcccggccatggtggcccagccactg
ctttcctcccaatcggtggacagttatcccggcgaagtgcgggctcgttttgaacctgag
ctggcattccgcatcggcggcaaggtcagcaagcgtctggtggaagtggggcaaagggtt
aaggccgatcagccgctggctgagctggatgccgaggacgtgcgcctgcaactggaagcg
acccgcgcccaggtcgctgccgcagaagccaacctgaatctggtgcgctccgagcgtgat
cgctacaagaccctgctggatcgccagatggtcagccgctcgcaatatgacaacgcggaa
aacctctatcgctccggcgaagcccggctcaagcagatcaaggccgagttgaccgtcgcc
gacaaccagacccgctacaccgttttgcgtgcttcccaggatggcgtcatcgccgggcgt
tcggtggaagtcgggcaagtggttgcggccggccagacggtttttaccctggcggcagat
ggcgagcgtgaagtgttgatcagcctgccggaacagaattttgcccgcttcaaggtgggt
cagccggtgtccgtcgagctgtggaccgtgcgcgatcagcgttttgccggtcgtatccgt
gagctgtcaccggctgccgatccgcgttctcgtaccttcgctgcgcgcattgcctttgcc
accgggcaggttccggtcgaactggggcagagcgcccgggtgtttatcgcggcagagcat
gcggttccgctgtccgtcccactctcggcggtcagctcggaaaatggcgccagctacgtc
tggcgggtcagccctgacggcattctcaagcgtgctcccgtgcagcttggggcatacggg
caggaatcggtgccggtactcgaaggcctgaaagaaaccgactggatcgtcgccgctggc
gtgcatgtgttgcgcgaaggcgaacggatccgcccggtggaccgcagcaatcgtgcggta
aaaatggcggccggggagtag
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