Pseudomonas cichorii: PCH70_12630
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Entry
PCH70_12630 CDS
T03002
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pci
Pseudomonas cichorii
Pathway
pci03030
DNA replication
pci03430
Mismatch repair
pci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCH70_12630
03430 Mismatch repair
PCH70_12630
03440 Homologous recombination
PCH70_12630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pci03032
]
PCH70_12630
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_12630
Enzymes [BR:
pci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCH70_12630
DNA replication proteins [BR:
pci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PCH70_12630
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PCH70_12630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AHF66416
LinkDB
All DBs
Position
1410006..1413527
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRVKPLIKALAGMNMPAVAVTDQNNMCSLVKFYKAAQGAG
IKPICGADLWLAGKDEDAQLSRISLLVMNPQGYRNLTELISRGFIEGQRNGLIIVEREWI
AEANEGLIALSAAKEGEIGMALLGGNPGEADELLREWMAIFPDRFYIELQRTNRTNDEEH
LHAAVALADRHGAPLVATNDVRFIKQTDFEAHETRVCIGEGRALDDPRRSHNYSDQQYLK
SPEEMAELFSDLPEALENTVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFEGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKVDEEAAEIWEMALKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDMPTYQ
LLQRAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHVDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCKTNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNISEFKFTVSDDGRILYGLGAI
KGVGEGPVEAITEARAAGPFKDLFDFCARVDLKRVNKRTLDGLIRSGALDRLGPYFEQEP
KAYQANIDRNRSVLLAALEEAIQAAEQTARSRDSGHSDLFGGLFVEEDADVYANHRKTRE
LSLKDRLRGEKETLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTIAGLIIALRVM
KNKKGDKMGFITLDDRSARIEASLFAEAFHSAQSLLQTDAMVVVEGEISNDDFSGGLRLR
AKRVMSIEDARTNLAESLRLTVHCDALKGDRLRWLGDLCKRHRGACPITLDYTGPDAKAL
LQFGEEWRIDPADSLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttctttcgttcatctacgcctgcacaccgaatactcactggtcgatggtctg
gtccgggtcaaaccactgatcaaggccctggccggtatgaacatgcctgccgtggcggtg
accgatcagaacaacatgtgttcgctggtcaagttctacaaggcggcccagggcgcaggc
atcaagccgatctgcggtgccgacctgtggctggcaggcaaggacgaagacgcccagctc
agccgtatcagcctgctggtgatgaatccccagggctatcgcaatctgaccgaactgatt
tcccgaggctttatcgaaggccagcgcaacggcttgatcatcgtcgagcgtgagtggatc
gccgaagccaatgaagggctgattgccctgtctgcggccaaggagggcgaaatcggcatg
gccctgctcggcggcaatccgggtgaggccgatgagctgttgcgcgagtggatggcgatt
ttccctgatcgtttctacatcgaattgcagcgcaccaaccggaccaacgacgaagagcat
ctgcatgctgccgttgccctggccgatcgtcatggcgcaccgctggttgcgaccaacgat
gtgcgtttcatcaaacagactgatttcgaagcacatgaaacccgtgtatgcatcggtgag
ggcagggcgctggatgacccgcgccgctcccacaactacagcgatcagcagtacctgaaa
agccccgaggaaatggccgagctgttcagcgatctgcccgaggcgctggaaaataccgtc
gaaatcgccaagcgctgcaatatcgacgtcaagctgggcacgcacttcctgcctaacttc
ccgatccccgatggcatgaccatcgatgaatatttccgcaaggtgtcgttcgaggggctg
gaggagcgtctgtcggttctgctgcccaaggacacgaccgaagattatgaggccaagcgc
caggtctatgtcgaccggctgaatttcgagctggatatcattatccagatggggttcccc
ggttacttcctgatcgttatggactttatccagtgggccaagaacaacggcgtgccggta
gggccgggtcgtgggtcgggcgccgggtcgctggtggcctatgtgcagaagatcacggac
ctggacccgctggaatacgacttgctgttcgagcgcttcctcaacccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggatggtcgcgaccgggtgatcgattatgtg
gccgagaaatacggccgcaatgcggtaagccagatcatcacgttcggttccatggccgcc
aaggctgtggtgcgtgacgtggcgcgggtgcagggcaagtcctacgggctggctgatcgt
ctgtcgaaaatgattccgtttgaagtgggcatgaccctggaaaaagcctacgagcaggaa
gagatcctgcgcgacttcctcaaggtcgacgaggaagcggctgaaatctgggaaatggcc
ctcaagcttgaaggggttgtgcgtaacgtcggcaagcacgccgggggcgtggttattgca
ccgaccaagctgacggacttctcgccgatctattgcgatgaggcgggcgacggtctggtg
acccagttcgacaaggacgatgtcgaggcggcggggctggtgaagttcgacttccttggg
ctgcggacgctaaccatcattgactgggcgctcaagaccatcaaccgcgaccgcgccaag
gtcaacgaagagcctctggacatcgctttcatcccgctcgacgacatgccgacctaccag
ttgttgcagcgggcagaaaccaccgcggtattccagcttgaatcccgcggcatgaaagag
ctgatcaagaagctcaagcccgactgcctggaagacctcatcgcactggtggccctgttc
cgtccggggcctttgcagtccgggatggtggacgacttcatcaaccgtaaacacggtcgt
gcagagctgtcctatccccacgtcgattaccagtacgaaggcctcaagccggtactggca
ccgacctacggcatcattctgtatcaggaacaggtgatgcagatcgctcaggtcatggcg
ggttataccctcggcggcgccgacatgctgcgccgtgcgatgggtaagaaaaaacccgag
gaaatggccaagcagcgcggcggtttcatcgaaggctgcaagaccaacaatatcgacccg
gacctggcgggtaacattttcgacctggtggagaaattcgccggttacggcttcaacaag
tcccactccgccgcctacggtctggtgtcctaccagaccgcatggctcaagacccattac
ccggcgccgttcatggcggccgtgttgtctgcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcggaccatgaagctgcgcctcgatgcgccggacgtgaacatt
tccgagttcaagttcacggtgagcgacgatggccggattctttacgggttgggcgcgatc
aaaggtgtgggtgaggggccggtggaggccattaccgaagcccgtgcggccggtccgttt
aaggacctgttcgatttctgtgcccgcgtcgatctcaaacgggtcaacaagcggacgctg
gacggcctgattcgcagtggcgcccttgatcgtctcggtccttacttcgagcaagagcca
aaagcctatcaggccaatatcgaccgcaaccgttcagtgctgctggcggcgctcgaagag
gcgatccaggctgccgagcagactgcccgtagccgtgacagcgggcactcggacctgttt
ggtggcctgttcgtcgaagaggatgccgacgtctatgccaaccatcgcaagacccgcgag
ctgagcctcaaggatcggttgcgtggcgagaaggaaaccctggggctctacctgaccggg
cacccgatcgatgagtacgaaggtgagatccgacgtttcgcccgccaacggatcatcgac
ctcaagcccgcacgcgatacccagaccatcgcggggctgatcattgccctgcgggtcatg
aagaacaagaagggcgacaagatggggttcattaccctggacgaccgctcggcacgaatt
gaagcttcactgttcgccgaagcgttccattcggcgcaatcgcttttgcagaccgatgct
atggtggtagtcgaaggcgaaatcagcaacgacgatttttccggtggcctgcgcctgcgc
gccaagcgtgtcatgagtatcgaggatgcacgtaccaacctggcagaaagcctgcgcctg
accgtgcattgcgatgcgctcaagggcgaccggctacgctggctgggcgatctgtgcaag
cgtcaccggggtgcgtgccctatcacgctggattacacgggacctgatgccaaggcatta
ttgcagtttggcgaggagtggcgaattgatccggcagacagcttgattcaagctctgcgt
gaccagttcggacgtgagaacgtctttctccagtatcgctga
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integrated database retrieval system
