Pseudomonas cichorii: PCH70_12750
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Entry
PCH70_12750 CDS
T03002
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pci03016
]
PCH70_12750
Enzymes [BR:
pci01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PCH70_12750
Transfer RNA biogenesis [BR:
pci03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PCH70_12750
Prokaryotic type
PCH70_12750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
E3_binding
Motif
Other DBs
NCBI-ProteinID:
AHF66428
LinkDB
All DBs
Position
1425016..1426074
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AA seq
352 aa
AA seq
DB search
MTELELLGQRAYGEALGSAVLKATAEDFQVDEVLDIPLSGDGEHLWLWVEKRGLNTEDAA
RRLARAAGVPLRTVSYAGLKDRQALTRQWFSLQLPGKADPDLLAAQDETLLILKSSRHKR
KLQRGAHAANGFTLRLTQLNAEHDALNQRLESIARKGIPNYFGAQRFGYQGGNLGEARHY
AERKALPEQRNVRSRLLSTARSYLFNRVLDARVADGTWERAQPGDLLAFTDSRSFFPAGV
AECSDPRLDILDLHPTGPQWGEGPSPASGATAELENRIAAEQAALCEWLIKAGMEHERRI
LRLPIGRLTWHYPEPDILQLEFVLPPGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggagctgctgggccagcgggcctatggtgaagcgctgggcagcgctgtt
ctcaaggcgacggccgaagactttcaggtcgatgaagtgctcgatatccccttgtccggg
gatggcgaacacctctggctgtgggtcgagaagcgtggcctcaacaccgaggacgcggcc
cggcgtctggcccgtgccgctggcgtgccgttgcgcaccgtcagctatgcaggcctgaaa
gaccgtcaggctctcactcgtcagtggttcagcctgcaattgccgggcaaggccgatccg
gaccttttagcggcccaggacgaaaccctgctgatcctcaagagcagccgccacaagcgc
aagctgcagcgcggtgctcatgcggccaatggcttcaccttgcgcctgacacaattgaat
gccgaacatgacgcgctgaatcagcgtcttgagtccattgcccgcaagggcatccccaat
tatttcggggcccagcgctttggctatcagggcggtaatctgggcgaagcccggcattac
gccgagcgcaaggccttgccggagcagcgcaatgtccgttcccggttgctgtccacggcc
cgcagctatctgttcaaccgcgtgctggacgcccgggtagccgatggcacctgggagcgt
gcccagcccggcgacctgctggcgtttaccgacagccggagctttttcccggctggtgtt
gccgagtgcagcgatccccggctcgacattctggacctgcatcccactggtccgcagtgg
ggtgaagggccttccccggccagcggcgcaaccgccgaactggaaaaccgcattgccgct
gagcaggcggctctgtgcgaatggctgataaaggctggaatggagcacgaacgtcgcata
ctgcggctgcccattggccgtttgacgtggcattatcccgagcctgacattttgcaactg
gaattcgtccttccgcccggatgctttgccactgtattggtgcgcgaactcgtcgatctg
gtgccggttgggcagacggacagcccatgcgtattctga
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