Pseudomonas cichorii: PCH70_15010
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Entry
PCH70_15010 CDS
T03002
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_15010
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCH70_15010
Archaeal homologous recombinant proteins
PCH70_15010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
MMR_HSR1
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHF66654
LinkDB
All DBs
Position
complement(1664909..1668553)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDVEGEITTSDPRTLLRRGTGSGYAEVDFVGIDQRRYRARWETNRARDNAA
KKLQASRQTLTDLDNEQILSNQSKREFEQLIEQRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKTLNAQAGNITPLEPEQRAELEQNH
SEAQQQHKAHQARLRQLELKQQWLTELHRLSDEQLSANESLNSAQQDWDNQQGQRQTLGQ
LERLGPQRHRFARRIALDTQLTPLADRIRQHQAQETTLQAQQQQLESARSNAHANLLEAQ
QQQNDAKPRLQQAFASQNTLNHLTQELAKIVALQQQAEQSCAEGQSQLQGLLDQQQQVAE
RLERIARQLEHSTELAPLAHAWNAWRDRLKSLTLTANRLKHGQGELPALQARAADADQQW
LQQRNDLEVLYREADCEAEAVTEQTQILGSLLQDNRKQQRAFEELARLWASQQEIDKQLQ
ALGQQQQEAQQERDQLNAEGIRTRDELKVAEQTLSVTQQLLERQRLARSASVEELREQLQ
DDQPCPVCGSVEHPWHQPEALLQSLTRHDETEQAGAQKAVDELKEKYNQLREQVGGVIAR
QKELIRQQERLALQQQELAPDLHAHPLGAQLLDRDAAQRDSWLKQQLSQLNEVINRDEQR
QDALLTLQKDAARLQQQVQAAHEASQTAARHVTDQIKQLEADRERLEEELTALATLVSTE
LLDKLRNDASATVMQLEQQVTQRLDQLEQQDEEQQEQRERQQRIEKEQAAQQNRVQRQTE
LAEQVQTLSQQQDASQQVLTELLGSHADAQQWQNALEQAVEQARHAETSAGQTLQDVHHQ
LIQLGAELKADQQQLQALEQESSELDGQIGEWRSSHQELDDAALENLLTYDDARIDQLRQ
QLNRSEKALEQAKVLLHEREQRLQQHQAQHSDITDNEQLAAALLQVQTECEISEQHCADL
RARLSEDEQRRNANSELQARIVQANGEYQRWARLAALIGSAEGDKFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKV
RRQGNGLSTIEVGD
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccattcgcctgaaaaacctcgcctcgctggccgggccgttcgagctg
gatttcaccgcagagcctctggccagtgccggtctgttcgcgatcaccggccctaccggc
gcgggcaagagcaccttgctcgatgccctgtgcctggcgctgttcggggcgattccgcgc
ctgagcaatatcggccagtccaaggtcccggatgtggaaggcgaaatcaccaccagcgac
ccgcgaacccttctgcgacgcggcacaggcagcggctacgccgaagtggattttgtcggc
atcgatcaacgtcgttaccgcgcccgctgggaaaccaaccgtgcacgggacaacgctgcg
aaaaagctgcaagccagccgccagacccttaccgatctggacaacgagcaaatcctcagc
aaccagagcaaacgcgagttcgagcaactgatcgaacagcgcctggggctcaacttcgag
cagttcacccgtgccgtgatgctggcacagagcgagttcagtgccttcctcaaggccgat
gacaaggaacgcagcgagctgctggaaaagctgaccaacaccgccatctacagccagctc
ggacgccgcgcctacagcaagagcaaggaagccgaagaagcgctcaagaccctcaacgcc
caggccggcaacatcaccccgcttgagcctgagcagcgcgctgaactcgaacagaaccac
agcgaagcccagcaacagcacaaggcccatcaggcccgactgcgccaactggaactcaag
caacaatggctcaccgagctgcatcgcctaagcgatgaacagctcagcgccaacgaaagc
ctgaacagcgcgcaacaggattgggacaaccagcaaggccagcgccagacactcggccaa
ctggagcgtctggggccacaacgccatcgcttcgcccgccgcatcgccctcgatacccag
ctcacgccgctggccgatcgcattcgccagcatcaagcccaggaaaccacgctacaggct
caacagcagcaactggaaagcgcccgcagcaatgcgcacgccaacctgctcgaagcccag
cagcaacagaacgatgccaagccacggctgcaacaggcctttgcaagccagaacaccctg
aaccacctgactcaggaactggccaaaatcgtcgcgcttcagcaacaggctgaacagagt
tgcgcagagggccagagccagttgcaaggtttgctcgaccaacagcaacaggtcgctgag
cgtctggaacgtatcgcccggcaactggaacacagcaccgaactcgccccgctggcacac
gcctggaacgcctggcgcgaccggctgaaatccctgacgttgaccgccaatcgcctgaaa
cacgggcaaggcgagttgcctgctctgcaagcgcgtgccgccgatgccgatcagcaatgg
ctccagcagcgcaacgacctggaagtgttgtaccgcgaggcggattgcgaagcagaagcc
gtcaccgaacagacccagattctgggcagcctgttgcaggacaaccgcaagcagcagcgc
gcctttgaagaactggcccgcctgtgggccagccagcaggaaatcgacaagcaactgcaa
gccctcgggcaacagcagcaggaagcccagcaggaacgcgaccagctcaatgccgaaggc
atccgcacgcgagatgaactcaaggtggccgagcagaccctgagcgtcactcaacagcta
ctggaacgtcagcgtctggcccgcagcgccagcgtcgaagaactgcgcgaacagttgcag
gatgaccagccgtgcccggtgtgcggcagcgtcgaacatccctggcatcaacccgaagcg
ctgctgcaaagcctgactcgacacgatgaaaccgaacaggccggcgcccagaaagcggtg
gatgagttaaaggaaaagtacaaccagttgcgcgagcaggtgggcggcgtcattgcccgg
cagaaagaactcattcgccagcaggaaagactcgccctccagcagcaggaactcgcccct
gatctgcacgcccacccgcttggcgcacaactgctggaccgtgatgccgcacagcgcgac
agctggctgaagcagcagctcagccagctgaacgaagtcatcaaccgcgacgaacagcgc
caggatgcattgctcacgttgcaaaaagacgctgcgcgcctgcaacagcaagtccaggct
gcccatgaagccagccagaccgccgcacggcatgtcacggaccagatcaagcaactggaa
gcggatcgcgagcgcctggaagaagaactgacagcgcttgccacactggtatccaccgag
cttctggacaagctgcgcaacgacgcttcggccaccgtcatgcagcttgagcaacaagtg
acccagcgtctggaccagcttgaacagcaagacgaagagcagcaggaacagcgcgaacgc
cagcaaaggatcgagaaggaacaggctgcgcaacagaaccgggtccagcgccagactgaa
ctggctgaacaggttcaaaccctgagccagcagcaagacgccagccaacaggtgctgact
gaactgctgggctcccatgccgatgcccaacagtggcaaaacgcgctggaacaagccgtc
gagcaagcccgacacgctgaaacctcggcaggccagaccttgcaggatgttcaccaccaa
ctgattcagctcggtgccgaactcaaggccgatcaacagcagttgcaggccctggaacag
gagtccagcgaactcgatggccagatcggcgagtggcgcagcagccatcaggaactggat
gacgcagcacttgaaaacctgctgacttacgacgacgcacgcatcgatcaactgcgccag
caactgaaccgcagtgaaaaggctctggaacaagccaaagtactgctgcatgagcgcgag
cagcgcctgcaacagcatcaggcgcaacacagcgacatcaccgataacgagcaactggcc
gctgccctgcttcaggttcagaccgaatgtgaaatcagcgaacagcactgcgccgacctg
cgcgccaggctgagcgaagacgaacagcggcgtaacgccaacagcgagctgcaagcgcgc
atcgtgcaggccaacggcgagtatcaacgctgggcgcgtctggcggcgctgatcggttca
gcggaaggcgacaagttccgcaagatcgcccaggcctataacctcgacctgctggtccat
catgccaacgcccaactcaggcaactggtgcgccgttatcgcctcaagcgcggcggcagc
atgcttggcctgctggtgctggacacggaaatgggcgatgaactgcgctcggtgcattcg
ctgtcgggcggggaaaccttcctcgtctcgctggcgctggcattggggctggcctcgatg
gcgtcgagcaccttgcgtatcgaatcgttgttcatcgacgaaggcttcggcagcctggac
cccgaatccctgcaactggccatggacgccctggacggcctgcaggcacagggacgcaag
gttggcgtgatctctcacgtacaggaaatgcatgagcggattccggtacagatcaaggtc
cgtcgacaggggaacgggttgagcacgatagaggttggggattga
DBGET
integrated database retrieval system