Pseudomonas cichorii: PCH70_15020
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Entry
PCH70_15020 CDS
T03002
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_15020
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCH70_15020
Archaeal homologous recombinant proteins
PCH70_15020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AHF66655
LinkDB
All DBs
Position
complement(1668550..1669794)
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AA seq
414 aa
AA seq
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MRLFHTSDWHLGQNLHGQERDFEHASFLSWLLARLAERQPDVLLIAGDIFDTVNPPVKAQ
ERLYDFIVNAHEQQPLLTIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVLWLDDGSLDA
ERLLLPLPDAKGDVKAWCLALPFLRPAEVTGATLGDDYLRGIAQVHELLIEAANAKRQPG
QALIAVSHAHMAGGSVSEDSERSLIIGNAEALPASLFGPSITYVALGHLHKPQRVNGEDR
IRYSGSPIPLSFSEIDYKHQILEINCDGEQLVSVEPRLIPRAVNLQRLGPAPLAELLLKL
KELPDIDLLADIDRQPWLEVRVRLDEPQPDLRNQIEIALQGKAVRLVRIGAEYAGKGSLD
GGDEQSTLIELGQLTPQELFSRAWEENFGSAVDEQTLTDFATLLREVQQESEQP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgtttcacacctccgactggcatctgggtcagaacctccacggtcaggagcgg
gactttgaacacgccagctttctgagctggctgcttgcccgtctggccgagcgacagcct
gatgtactgctgatcgcaggcgatatcttcgatacggtcaacccgccggtcaaagctcag
gagcgcctgtacgactttatcgtcaacgcccatgagcaacagccgctgctgaccattgtc
atgattgccggcaaccacgactccggctcgcgtatcgaattgcctgctccgctgatgcgc
cgcttgcgcactcacgcgctggggcgggtgctgtggctggatgatggttcgctggatgca
gagcgcctgctgctgccgttgccggatgcaaaaggtgacgtcaaggcatggtgtctggcc
ttgccgtttctgcgcccggccgaagtcacgggtgcgacactgggtgacgactacctgcgc
ggcattgcccaggtccatgaactgctgatcgaggctgccaacgcaaaacgtcagccgggc
caggccctgatcgcggtcagccatgcacatatggccggaggctcggtgtccgaagactcc
gagcgcagcctgatcatcggcaatgccgaagcgctgcccgccagcctgttcggcccgagc
atcacctacgtcgccctcggccatctgcacaagccgcagcgggtcaacggtgaagatcgc
attcgctacagcggttcgcccattccgttgtcattctcggaaatcgactacaaacaccag
attctggaaatcaactgcgacggcgagcaactggtcagtgtcgagccacgcctgatcccc
cgcgccgtcaacctgcaacgcctcggccctgccccgctggccgaactgctgctgaaactc
aaggaactgccggacatcgacctgctggccgacattgaccgccagccctggctggaagtg
cgcgtacgcctggacgagccgcaaccggacctgcgcaaccagatagaaatcgccctgcaa
ggcaaggccgtgcgtctggtgcgcatcggtgccgaatatgccggcaagggcagccttgat
ggcggtgatgagcaatcgaccctgatcgaactgggccagctcacgcctcaggaactgttc
agccgtgcctgggaagaaaacttcggcagcgcggtggatgaacagacccttaccgatttc
gccacgctgctgcgtgaagttcagcaggagagcgaacagccatga
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