Pseudomonas cichorii: PCH70_15560
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Entry
PCH70_15560 CDS
T03002
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pci03032
]
PCH70_15560
03036 Chromosome and associated proteins [BR:
pci03036
]
PCH70_15560
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_15560
DNA replication proteins [BR:
pci03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PCH70_15560
Chromosome and associated proteins [BR:
pci03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PCH70_15560
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PCH70_15560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Barstar
Motif
Other DBs
NCBI-ProteinID:
AHF66709
LinkDB
All DBs
Position
1737898..1738170
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARIG
RNPQTGKTLEIAAAKKPGFKAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgatgctatcgctgcatctgctgatatcccgaaagctgct
gctggccgtgcgctggatgcagtgatcgaatccgtcactggcgctctgaaggctggcgac
tctgttgttctggttggctttggtactttctccgttacagatcgtcctgctcgtatcggt
cgcaacccacagactggtaagacgctggaaatcgctgctgctaaaaaaccaggtttcaaa
gccggtaaagccctgaaagaagcggtcaactaa
DBGET
integrated database retrieval system
