Pseudomonas cichorii: PCH70_15670
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Entry
PCH70_15670 CDS
T03002
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pci01011
]
PCH70_15670
Enzymes [BR:
pci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PCH70_15670
Peptidoglycan biosynthesis and degradation proteins [BR:
pci01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PCH70_15670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
NMB0315_dom_I
LysM2_CERK1_LYK3_4_5
DUF7450
LPAM_MltD
Motif
Other DBs
NCBI-ProteinID:
AHF66720
LinkDB
All DBs
Position
complement(1752370..1753890)
Genome browser
AA seq
506 aa
AA seq
DB search
MAVAASALLAGCQTTSHVEPSSTYRTSNLATHIKQKPIFITQTPSPSAPPQDIWDRMRQG
FQLQQNNDQNPRIDQQRLWFANNPSFLEGAGERGSLYMHYIVERLEERNMPLELALLPVI
ESAYNPMAISRSQAVGLWQFIPSTGRYFNLRQTNFYDGRRDIQASTVAAMDYLTKLHDMF
NGDWLLALAAYNAGEGTVSRAIERNEKLGLPTDYWNLPLPQETRDYVPKLLALSQVVLSP
DAYGVNLNPIANEPYFEVVELNKRVDLSKVASLANIDEDELIQLNPAFKKRLTIDGPQHL
LVPTSKAQLLTASLSAMKPEELTAWQPYRVRRGDTLESLAGRYQVTVSSIKSNNRLEGNR
LKAGQSLNIPVQPGTKSSQPVFEELASNDKPATGRSYKVRSGDNLSSIAQAHKVDVVELQ
RWNKLSGNKLQIGQTLVVQGGKANSTATASAEPGDKKSMQYKIQKGDSMYLVAKRFNVDM
KHLKRWNPRTGQALKPGQTLTVYLPH
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtggctgtagccgcgagcgccctgctggcaggctgccagaccaccagtcacgtcgagccc
agcagcacttaccgcacgtccaacctcgctacccatatcaagcaaaaacccatcttcatc
acccagacgccaagcccttcggcaccaccccaggatatctgggaccggatgcgccagggc
ttccagctgcaacagaacaacgaccagaacccgcgtatcgaccagcagcgtctgtggttc
gccaacaacccctcgtttctggaaggcgcaggcgagcgtggcagcctctacatgcattac
atcgtcgagcgccttgaagaacgcaacatgcccctcgaactggccctgctgccagtgatc
gaaagcgcctacaacccgatggccatttcccgcagccaggctgtcggcctgtggcagttc
atcccgtccacagggcgttacttcaatctgcgccagaccaacttctatgacgggcgccgc
gatatccaggcatccaccgtggcagccatggattacctgaccaagctgcatgacatgttc
aacggcgactggctgctggcactggccgcctacaatgccggcgaaggcacggtcagccgc
gccatcgaacgcaacgagaagctcggcctgcctacagactactggaacctgccgctgcca
caggaaacacgtgactacgtgcccaagttgctggccttgtcccaggtggttctgtcgccg
gatgcctatggcgtcaacctgaacccgattgccaacgagccctatttcgaagtcgtcgag
ctcaacaagcgtgtcgacctgtccaaggtcgcgagcctggccaatatcgacgaagacgag
ctcatccagctcaacccggccttcaagaagcgcctgaccatcgacggccctcagcatttg
ctggtgccgacatccaaggcccaactgttgacggcaagcctgtcggccatgaagcccgaa
gaactgaccgcatggcagccctaccgtgtgcgccgtggcgatacgctggaaagccttgcc
ggtcgttatcaggtgacggtcagctcgatcaagagcaacaacagactggaaggcaacagg
ctgaaggcaggtcaatccctgaacattccggtccagcccggcacgaagtcttcgcagcca
gtgttcgaggaactggccagcaacgacaagccggccaccggccgcagctacaaggtcagg
agtggcgacaacctgtcgagcatcgctcaggcacacaaggttgatgtcgtagagctgcaa
cgctggaacaagctttccggcaacaagctccagatcggccagacgctggtcgtacagggc
ggcaaggccaatagcacggcaaccgccagcgccgagcccggcgacaagaaatccatgcag
tacaagatccagaaaggcgactcgatgtatctggtcgccaagcgcttcaatgtcgacatg
aagcatctcaagcgctggaacccgcgtaccggtcaggcccttaaacccggccagaccctg
actgtctacctgcctcattga
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