Pseudomonas cichorii: PCH70_15860
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Entry
PCH70_15860 CDS
T03002
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pci03000
]
PCH70_15860
Transcription factors [BR:
pci03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PCH70_15860
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_9
HTH_IclR
PDZ_3
Motif
Other DBs
NCBI-ProteinID:
AHF66739
LinkDB
All DBs
Position
complement(1779090..1779725)
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AA seq
211 aa
AA seq
DB search
MRTRRAGIWVMSSIRERNKELILRAASEEFADKGFAATKTGDIAAKAGLPKPNVYYYFKS
KENLYREVLESIIEPILRASTPFNPQGVPKEVLSRYIRSKIQISRDLPFASKVFASEIMH
GAPHLTPEQIEQLNGQARHNIECIQAWIDSGQIAPLDPHHLMFTIWAATQTYADFDWQIS
TVTGKDKLEDADYEAATQTILRLVLKGCEPD
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacccgccgtgcaggaatctgggtcatgagcagtattcgcgagcgcaacaaagaa
ctgatcctgcgcgccgccagtgaagaattcgccgacaagggttttgccgcgaccaagacc
ggcgacatcgccgccaaggccgggctgcccaagcccaacgtctattactacttcaagtcc
aaggaaaacctctatcgcgaggtgctggaaagcatcatcgagccgattctgcgcgcctcg
acgccgttcaatccccaaggcgttcccaaggaagtgctcagccgttacatccgctcgaaa
atccagatttcccgtgacctgcccttcgcctcgaaagtgttcgccagcgagatcatgcac
ggcgccccccatctgacgcccgaacagatcgaacagctaaatggccaggcccgacacaat
atcgagtgcatccaggcatggatcgacagcggccagattgcgcccctggaccctcatcac
ctgatgttcaccatctgggccgcgacccagacctatgccgactttgactggcagatctcg
acggtcaccggcaaggacaagcttgaggatgcggactatgaagcggcgacccagaccatt
ctgaggctggtgctcaaggggtgtgagccggattga
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