Pseudomonas cichorii: PCH70_16420
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Entry
PCH70_16420 CDS
T03002
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pci
Pseudomonas cichorii
Pathway
pci03030
DNA replication
pci03430
Mismatch repair
pci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCH70_16420
03430 Mismatch repair
PCH70_16420
03440 Homologous recombination
PCH70_16420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pci03032
]
PCH70_16420
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_16420
Enzymes [BR:
pci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCH70_16420
DNA replication proteins [BR:
pci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PCH70_16420
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PCH70_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
AAA_18
TIP49
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
AAA_7
Rad17
SKI
DUF3646
Mg_chelatase
Herpes_Helicase
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AHF66795
LinkDB
All DBs
Position
1852372..1854495
Genome browser
AA seq
707 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCQEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLSHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLTALLEGDARGLLEAVRHLAEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
AESADAPRQPLKPVGINQAAVDSRPPVAVATAVAPVAPVTPAAAPAPVVAPAPVVEKPAP
EPVQPPVQEAAPVEEIDLPWIESKAPVAEPVPEPVAEPEPEPVLETVAEQPELTPMPTPE
PASPVPDAPQVQQPEPVAEQQVTPGMLEAIPDSAYMSAPMDRDDEPPADDDYVEPDIDID
PASYSYLDELAHESVTEAEASEPEPEPAAMPATGLALQWLEMFPQLPISGMTGSIAANCT
LIKAEGDNWLLHLDPAHSALFNSTQQRRLNDALNQFHGRTINLSIELIKPEQETPAQAAS
RLRAERQRQAEASIHADPFIQQMLQQFGAVIREDTIKPVDAPVAQAH
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctgaaggccctgatcaatgcgctggacagccagcggctgcaccatgcc
tatctgttcaccggcacccgtggcgtcggcaagacgaccattgcgcggatcatcgccaag
tgcctgaactgtgaaaccggcattacttcaacgccttgcggtacctgttcggtctgtcag
gaaatcgacgagggccgttttgtcgacctgatcgagatcgacgccgccagccggaccaag
gtcgaggacacccgcgagttgctggataacgtccagtacgcaccgagccgcgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccactcgttcaatgcgttgctc
aagaccctcgaagagccaccgccttacgtcaagttcatcctggcgaccaccgacccgcaa
aagctgccagccacgattctgtcgcgctgcctgcagttctcgctgaagaacatgaccccc
gagcgtgtggtcgaacacttgagccatgtgctgggtgtcgagaatgtgccgttcgaggac
gacgcactctggctgttgggccgtgcggctgatggttcgatgcgtgacgccatgagcctg
accgatcaggccattgctttcggcgaaggcaaggtcatggccgccgatgtgcgtgccatg
ctgggcacactggaccatggtcaggtgttcgatgtgctgacggccttgctggaaggcgat
gcacgcgggctgctggaggccgtgcgtcacttggccgagcaagggcctgactggaatggc
gtgctgtcggagattctcaacgtcctgcaccgtgtggcaattgcccaggcgctgcccgag
ggtgtcgacaacggtcacggtgaccgtgatcgcgtactggctctggcacaggcgctgcct
gccgaagatgtacagttttattaccagatgggcctgattggacgtcgcgatcttcctctg
gcgccggacccgcgcggcggctttgaaatggtgctgctgcgcatgctggccttccgtcct
gccgagagcgccgatgcgccgagacagccgctaaagccagtggggatcaaccaggccgca
gttgattcccgacctccggtggcagttgccactgccgttgccccggttgctcccgtcacg
cccgctgctgcgcccgcaccggttgtcgcgcctgcgcctgtcgttgaaaagcctgcgccc
gagcccgtgcagccgcctgttcaagaggctgcgccggtcgaagaaatcgatctgccatgg
attgagtccaaggcccctgttgccgagccggtgcctgagcctgtcgctgagccagagcca
gaacccgtgcttgaaaccgtggccgagcagcccgagctgacgccaatgcccacgcccgag
ccggccagcccggtgccggacgcgccgcaggtccagcagcccgagccggtggctgagcag
caggtgacaccgggcatgcttgaggccattccggattcggcctatatgtcggcccccatg
gatcgcgacgacgagccgcctgcggatgacgactatgtagagccggatatcgacatcgat
cctgcttcctatagctatctcgatgagctggcccacgaaagtgtcaccgaagccgaggca
tcggagcccgagccagaacccgctgcgatgccggccacgggccttgcgctgcaatggctg
gaaatgttcccgcagttgcccatttcgggcatgacaggcagcatcgccgccaactgcaca
ctgatcaaggccgaaggcgataactggctgctgcacctggaccctgcccacagcgccttg
ttcaactcgactcagcagcgtcgcctcaatgatgcgttgaaccagttccatggccgcacg
atcaatttgagtatcgagctgatcaagcccgagcaggaaacccctgcccaggcggcgtct
cgcttgcgtgccgagcgtcagcgtcaggccgaggcttcgattcatgccgatccgttcatc
cagcagatgttgcaacagtttggcgcagtgattcgggaggatacgatcaaacccgtggac
gctcccgtagcgcaggctcattaa
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