Pseudomonas cichorii: PCH70_20310
Help
Entry
PCH70_20310 CDS
T03002
Name
(GenBank) hypothetical protein
Organism
pci
Pseudomonas cichorii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactonase
SGL
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
NHL
DUF1513
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
AHF67184
LinkDB
All DBs
Position
complement(2274970..2280525)
Genome browser
AA seq
1851 aa
AA seq
DB search
MMFDAAAVATATEVAAASETQSASPAADKTADNSTTSIAHENSSTSGNDQENATTSQRTT
ALATDNGAHLSLDALTSLETLNTISGLSNIAQTELSSDGKTLYAASSTGELAIFSRDTET
GALTLSNTLTASDTQLTLIIDLKISPDGETLLMSGANGRSYSDTLAVFNRDPATGSLVFL
ESHYILTIETLEISDDGKSVYAVDSGNEGIYVFSRDTASGSLTRLNLVENTSWSPPYMFA
ISAMESRGDYVFVTTQTFSPPHTLIAYQRDADGNLGSPFYIRDGQQDSAGTTVSLKAPSQ
INVSPDGQNLYVTTSEGIVTFRVEGQSFVVQNSISQANITSTALSSNGSTLYATLSDGTI
NRYSATTSGLVLLNSTAGGQSDASAIQVSADGGVIVTGSGISVLQEASTRYLEGTTAQKL
SDAVVSDSTLDALDNGNGDYNGASFSVTPQRGDNAEDTLSFIPTGSLTLSSDGSQILNGG
TAIANLTVNGSSLSITFTGQVSTALANQVLQQVGYSNTSSDAGSLAVMVMAFDNGQGAST
SLNVEVRLVDINNAPTLTTTATDPRYSAQGNPVAVFQDTVIDTGERAQSVSGLDLSVTDI
QDGTNEVLVVDGTRITLTQGNTGTTRSGLSYVVSVSGTTASIGLSGGNLSVTNAQALVNG
IGYYNDSTTITGVDRVVGLTLIRDNGTTANGGIDSTALNLTSTVTMRDNSAPLLSDVPTN
LAYTEKAAAISLLADTGFSDVELDSDGDYRDASIRIVRSEGANAADIFGFQEGNGFTLSA
DGQQVLKDGNVIASFNLTDGALVLTFTASQPVSAADANQVLKQITYANENSDPGSQVSLN
LSINDGDGLTSTVHTIAITVTEINDAPELTASALDPTLSFGNNTALFSDTQISTVEQGQS
IIVLRLEITGLSDGSQERLNINGTLVELVNGTQTVGDYTYTVSLSTDTATLTITPVSGIS
TEAAQTLIDGIRYSNASLAPTLGSRTVTLVSIQDSGGTLDGGTDVSDLNIASTVNVTANT
APGISNPNPGTVLTSPAITDPTQPTQLTPGSVDSAPSAMATSSDGKFVYIVAGKTLTIYA
RTADGLVEQGSFSDDQYFSDRDVFLEGMDRVSSVTLSVDGRFLYVAGFEATSETGALSTI
TLYQRDVTTGALSYMGIAASNATSSNYFGQMVVSADGRSLYAVSADSSNSGITTFTINAQ
GGLTQSGHLSDGIGQSSDVVISSDGRSVYVSNSWDSGIAIFSRDTTTGALSFVGSLTALG
NGQNLSSIGGLALSSAGDFLYVSDKNSNSIRVFSRNADGTLTLTSTLRDGLRSVYSLADI
TLSADGSAFYLAHEGSDPSLLVYSRDATSGALTFVRAYSSSTGFNNLVSATDGSLYALGS
EWSGSDVVILSSPTSAPHFTQGGDAVLLAPNGLVSDAELDALNEGTGNYKGATLTVARQD
GASAEDRFGLQDSATLTLSSDGSQILLNDTAIATFSQSAGRLTITFTGDISQAQAQSVLQ
HLTYLNSADTPPAQVQLAASINDGLLDSNSASFTIAITATSTPVITPPVVTPPVVELPVV
TPPVVAPPVVTPPDTDGGTVITPPPTDVDTGSSTPTTNVTEPVIVATQSAPLMGLRPSGF
NEVRQTETSLPPGISPLGLPAEINSTLNTVLPDATGLESSQRSVTEQLLGSSSILSDTLA
SSQSARPGETWQMQVNAASSGNSEVQLPLSLLANNQSSPQLRMSNGLPLPSWVRFDPRSG
KLIVDNRQLTAAQRLNLVLITRDRSGQEQRTPVQIEAGERPQDAATRPTPANTPQAPIPE
QALRARLQDSAPSLNLAHQAQSLLESLLSIVDNESNETVANAATQDDQRVA
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcgatgcagcggcggtcgccacggcgacggaagtcgctgctgcaagcgaaacc
cagagcgccagtccggcagcagataaaacggcagacaactccacgaccagcattgctcat
gagaacagcagcacttcaggcaatgatcaggaaaacgccaccacaagccagcgcaccaca
gcgctggcgaccgataacggtgcccacctgagtctggacgctctgacaagcctggaaacc
ctgaacacgatcagcggcctgagcaatattgcgcaaaccgaactgtccagtgatggcaag
accctgtacgcagccagcagtacaggtgagctggcgatcttcagccgtgacaccgagact
ggcgcgttgacgctaagcaacaccctgacggccagcgacactcagctgactttaatcatt
gatctgaagatcagcccggatggcgaaacgctccttatgagcggtgcaaacggcaggtcc
tattcggacacgcttgccgtattcaaccgcgatccagccacaggaagccttgtcttcctt
gaaagccattacatcctcacgatagaaacactggaaatctcggacgacggtaagtcggta
tatgccgtcgatagcggcaacgaagggatctatgtcttcagccgtgataccgccagcggc
agtctgacgcgactgaatctggtcgagaacacgtcatggagcccaccttacatgttcgcc
atatcggccatggagagccggggagattacgtattcgtaacaacccagaccttctcccca
ccccataccctgatcgcctatcaacgcgatgccgatggcaacctgggctcgccgttctac
attcgcgatggtcagcaggacagcgccggcacgacggtttcgctcaaggcgccgagccag
atcaatgtctcgcccgatggccagaacctctacgtaaccacctctgaaggcattgtcacg
ttccgggtcgaaggccagtcctttgtcgtccagaactcgataagccaggccaatatcact
tcaacggccctgagcagtaacggcagtacgctttatgccactctcagcgacggcaccatc
aatcgctacagcgccacgacgtcaggtctggtgctgctcaatagcacagccggtggccag
agcgacgccagcgcgattcaggtcagcgccgatggcggcgtgattgtcacgggctcgggc
atcagcgttctgcaagaagccagcacccgctacctggaaggcacgaccgcacaaaagctg
agcgatgcagtggtcagcgactcaaccctggacgccctcgacaacggtaatggtgactat
aacggcgcaagcttcagcgtcacgccgcaacgcggtgacaacgccgaagacaccttgagc
tttatccccaccggcagcctgaccttgagcagtgacggttcgcaaatcctgaacggcggc
acggccatcgccaacctgacagtcaatggctccagcctgagcatcacctttaccggccag
gtcagcaccgcgctggccaatcaggtactccagcaggtcggctacagcaacaccagttcg
gatgccggaagcctggcggtcatggtaatggcgttcgacaacggccagggcgccagcacc
tcactgaacgtggaagtgcgtctggtggacatcaacaacgcccccactctgaccaccacc
gccaccgatcccagatactccgcccaaggcaacccggtcgctgtgtttcaggacactgtc
atcgataccggcgaaagagcccagtcggtcagcggcctggacctgagcgtcaccgacata
caggacggtaccaacgaagtgctggtcgttgacggcacacgcatcaccctcacccaaggc
aataccggcaccacccgcagtggcctgagttatgtggtcagcgtcagcggcacaaccgcc
agtatcggtttgagtggcggcaacctcagcgtgaccaatgcgcaggcgctggtaaacggc
atcggctattacaacgacagcaccaccatcaccggcgttgatcgggtggtcggcctgaca
ctgattcgcgacaacggcacaacagccaatggcggcatcgacagcacagcgctgaacctg
acctccaccgtgaccatgcgcgataacagcgcaccgctgctcagtgacgtaccgacaaac
ctggcctacaccgaaaaagcggcagcgatttcactgctcgcagacacaggcttcagcgat
gtcgaactggacagcgatggcgattaccgcgacgccagcatccgtatcgtgcgcagcgaa
ggtgccaacgcagccgatatcttcggttttcaggaaggcaacggctttacgctgtccgcc
gatggccagcaagtgctcaaggacggcaacgtcattgccagcttcaacctgacagacggc
gcactggtgctgaccttcacggccagccagccggtcagcgccgccgatgccaatcaggtt
ctcaagcagattacctatgccaatgaaaacagcgatccaggcagccaggtcagcctgaac
ctgtcgatcaacgatggcgacggtctgacatcgaccgtacataccattgccatcaccgtg
accgaaatcaacgacgcgccagagttgaccgccagtgccctcgacccgaccctgagtttt
ggcaataacacggcgctgttcagcgacacgcagatttccacggtggaacagggtcaatcc
atcatagtgttgcgtctggaaataaccggcctgagcgatggcagccaggaacgcctgaac
atcaatggcacccttgtggaactggtgaacggcacgcaaacggtcggcgattacacctac
accgtcagcctgtcgacagacacggccacgctgactatcaccccggtcagcggcatcagc
actgaagcggcgcaaaccctgatagacggcatccgttacagcaatgccagcctggcaccg
accctgggcagccgtaccgtaacgctggtgagcattcaggacagcggcggcacgctggat
ggcggaactgacgtcagcgacctgaacattgcctccacagtgaatgtcactgccaatacc
gcacccggcatcagcaacccgaatccgggaacggtgctgacctcacccgccatcaccgac
ccgacccaacccacccaactgacaccgggcagcgtggactcggcaccttcagccatggcc
acttccagtgatggcaagttcgtctatatcgtggccggcaagaccctgacgatctacgcc
agaacagcagacggcctggtcgagcaaggcagcttcagcgacgaccagtatttcagcgac
cgggacgtcttcctggaaggtatggaccgggtatcctcggtcacgctgtcggtggatgga
aggtttctgtatgtggccggtttcgaggctacttccgagacaggtgcgctttcgaccatc
accctgtatcagcgcgacgtcaccaccggggcgctcagttatatgggcattgccgccagc
aacgccacaagcagtaactattttgggcaaatggtggtgtccgccgatggaaggtcgttg
tatgccgtcagcgccgacagctcaaacagcggcatcacgaccttcaccatcaatgctcag
ggaggcctgactcaatccgggcatctgtcggacggtattggccaaagctcggacgtggtg
atttccagcgacggccgctcggtctatgtcagcaatagctgggacagtggcatcgctata
ttcagccgcgacacaaccaccggcgcactcagctttgtgggttcactgacagcactgggc
aacggtcaaaacctcagttcgatcggcgggcttgccctgtccagcgcgggcgactttctt
tatgtctcggacaagaacagcaactcgatccgggttttcagccgcaacgccgatggcacc
ctgacgctgaccagcaccctcagggacgggctgagaagtgtctattcactggcggatata
accctcagtgccgatggcagcgctttttatcttgcccacgaaggcagtgatccgagcctg
ctggtgtacagccgagacgccaccagcggtgccttgacctttgttcgtgcctattcgtca
tcgacaggcttcaacaacctcgtcagcgccacagatggcagcctgtatgccttgggcagc
gagtggtcaggttcggatgtggtgatcttgagcagcccgaccagcgccccgcacttcact
cagggtggcgatgccgtactgctcgcgcctaacgggcttgtcagcgatgccgagctggat
gcattgaacgagggcacaggcaattacaaaggggccaccctcaccgtggcgcgccaggac
ggtgccagcgccgaagaccgctttggcctgcaagattctgcaacgcttaccctgtccagc
gatggcagccagatcctgctcaacgacaccgccatcgccacgttcagccagagcgctggc
cgcctgaccatcacctttaccggcgatatcagccaggcacaggcgcagtcggtgctgcaa
cacctgacctacctcaacagcgccgacacaccgcctgcgcaggtgcaactggcggccagt
atcaacgatgggctgctggactcgaacagcgcgagttttaccatcgcaatcacggcaacc
agcacgcccgtcataacgccgccagtggtgacgcctcctgtcgtggaactgcctgtagtg
acaccgccagtcgtagcacctcctgtagtaacgccgccagatacagacggcggtaccgtc
attacaccgccgccaaccgacgtggataccggcagcagcaccccgacaaccaacgtcacc
gagccggttatcgttgcaacgcaatccgcgccgctgatggggctgcgcccaagcgggttc
aatgaagtccggcaaacagaaacgtccttgccaccgggcatcagcccgctcggcttgcca
gcagagataaacagcacgctgaacactgtcctgcccgacgccacggggttggaatcgagt
cagcgcagcgtcaccgagcaactgctcggcagtagcagcatcctcagcgacaccctggcc
tccagccagtcggcacgtccgggcgaaacctggcagatgcaggtcaatgctgccagcagc
gggaacagcgaagtgcaactgccgctgtcgttgctcgccaacaaccagagcagcccgcaa
ctgcgcatgagtaatggtttgcccttgccaagctgggttcgattcgacccgcgcagcggc
aaactgattgtcgataaccgccagttgactgccgcgcaacgcctgaacctggtgctgatc
acccgcgaccgctccggtcaggaacaacgcacacccgtccagatcgaggccggtgaacgg
cctcaggatgcagccacccggccaacacctgcaaacactccacaagcgcccataccggaa
caggccttgcgcgcccgactgcaagacagcgcgccgagcctgaacctggctcatcaggcc
cagagcctgttggaaagcctgctctcgatcgtggacaacgaatccaacgaaaccgtcgcc
aacgcagcgacccaagacgaccagcgcgtcgcatga
DBGET
integrated database retrieval system
