Pseudomonas cichorii: PCH70_21600
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Entry
PCH70_21600 CDS
T03002
Name
(GenBank) acrB/AcrD/AcrF family protein
KO
K18296
multidrug efflux pump
Organism
pci
Pseudomonas cichorii
Module
pci_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_21600
01504 Antimicrobial resistance genes [BR:
pci01504
]
PCH70_21600
Transporters [BR:
pci02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PCH70_21600
Antimicrobial resistance genes [BR:
pci01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
PCH70_21600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AHF67313
LinkDB
All DBs
Position
complement(2428277..2431393)
Genome browser
AA seq
1038 aa
AA seq
DB search
MSLFFIKRPNFAWVVALFILLAGLMALPSLPVAQYPVVAPPQITITATYPGASAKVLVDS
VTSVIEDELNGAKGMLYYESTSNSTGSAEINVTFNPGTNPDMAQVEVQNRIKKAEARLPQ
PVLSQGLQVEQASSGFLMIFALSYKGDSTNKDTVALADYAARNVNNEISRVNGVGKLQFF
AAEAAMRVWIDPQKLVGFGLSIDDVNTAIRGQNVQVPAGSFGSTPGSSLQELTATLAVKG
TLDNPEEFGRIVLRANQDGSTVHLADVARLAVGSQDYNFESRLNGKRAVAAAIQLSPGAN
AIETVKAVKQRLTELSVNFPDDVEFSVPYDTSRFVDVAIDKVIYTLIEAMVLVFLVMFLF
LQNIRYTLIPTIVVPVCLAGTLAIMYLLGFSVNMMTMFGMVLAIGILVDDAIVVVENVER
IMAEEGLSPAAATVKAMGQVSGAILGITLVLAAVFLPLAFMGGSVGVIYQQFSLSLAVSI
LFSGFLALTFTPALCATLLKPIPAGHHEKRGFFGGFNRLFEKLTHRYERLSSSMLQRAGR
YMLVYVGIVGLLGFFYLRLPESFVPVEDQGYLIVDVQLPPGATRARTDETAQLLEKYLMS
RESTDSVTMLLGFSFSGMGENAGLAFPTLKDWSERGKGQSAADEAAAFNQHFAGLSDGTV
MAVTPPPIEGLGTSGGFALRLQDRAGLGREALLAARNELLGKANGNPKILYAMMEGLAEA
PQLRLSIDREKARALGVSFESINNALSTAFGSSVISDFANAGRQQRVVVQADQDSRMTPE
SVLKLHVPNSSGTLVPLGAFVTTHWEEGPVQIARYNGYPAFKISGDAPPGVSTGEAMAEI
ERIVSELPPGIGYEWTGLSYQEKVASGQATVLFALALVVVFLLLVALYESWAIPLVVMLI
VPVGALGAVLAVTAVDMPNDVYFKVGLITIIGLAAKNAILIVEFAKELWEQGHSLRDSAL
QAARLRFRPIVMTSLAFILGVVPLTIATGAGAASQRAIGTGVIGGMLSATLLGVILVPIF
FVWVLSVLRRKPHPVEQE
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgttctttatcaagcgccccaacttcgcgtgggtcgttgccttgttcatcctg
ctggcgggcctgatggcgctgccgtcgctgccggtggcgcaatacccggtcgtggcgccg
ccgcagatcaccatcaccgccacctaccccggcgcttccgccaaggtgctggtggactcg
gtcaccagcgtcatcgaggacgaactcaacggcgccaaggggatgctgtattacgagtcg
accagcaactccaccggttctgccgaaatcaacgtgaccttcaatccggggaccaacccg
gacatggctcaggtcgaagtgcagaaccgcatcaagaaagccgaagcgcgcctgccgcag
ccggtgctgagccagggtttgcaggtggaacaggccagctccgggttcctgatgattttc
gccctgagctacaagggcgattcgaccaacaaggacaccgttgccctggccgactatgcg
gcgcgtaacgtcaacaatgaaatcagccgtgtgaacggcgtcggcaagctgcagttcttt
gccgcagaagcggccatgcgcgtgtggatcgacccacagaaactggtgggtttcggcctg
tccatcgatgacgtgaatacggcgattcgtggccagaacgttcaggtgcctgccggcagc
ttcggcagtacgcctggctcatcactgcaagagctgaccgcaaccctggcggtcaagggc
acgctggataatcccgaagagttcgggcgcatcgtgctgcgcgccaatcaggatggctcc
accgtgcatctggccgatgtcgcacgccttgccgtgggcagccaggattacaacttcgag
tcgcgcctgaacggcaagcgtgccgtggcagccgccatccagctctcgccgggcgccaac
gccatcgagacggtaaaggccgtcaagcaacgcctgaccgagctgtcggtcaatttcccg
gacgacgtcgagttctccgtaccctatgacacctcgcgctttgtggatgtggccatcgac
aaggtgatctacaccctgatcgaagccatggtgctggtgtttctggtgatgttcctgttc
ctgcagaacatccgctataccctgatcccgaccatcgtggtgccggtctgtctggcgggt
acgctggcgatcatgtacctgctgggcttctcggtgaacatgatgaccatgttcggcatg
gtcctggccatcggtatcctggtagacgacgccattgtggtggtggagaacgtcgagcgg
atcatggccgaagaaggcttgtccccggcggccgcgacggtcaaggcgatgggtcaggtg
tcgggtgcgattctgggcatcactctggtgctggctgccgtgttcctgccgctggccttc
atgggcggttcggtcggcgtgatctaccagcagttctcgctgtcgctggcggtgtcgatc
ctgttctcgggcttcctggccctgacgttcacacccgcgctgtgcgccaccctgctcaag
cctattccggccgggcatcacgaaaaacgcggtttcttcggcggcttcaaccgcctgttc
gaaaagctgacacaccgctacgagcgactgagttcgagcatgctgcaacgtgcgggccgc
tacatgctggtgtatgtcggcatcgtcggcctgctgggcttcttttatctgcgcctgccg
gaatccttcgtgccggtcgaagaccagggctacctgatcgtcgacgtgcaactgccgccc
ggtgcgacccgtgcgcggaccgatgaaacggcacagttactggaaaagtacctgatgtcc
cgcgagagcaccgactcggtgacgatgctgctgggtttcagtttctccggcatgggcgaa
aacgccggtctggctttcccgaccctgaaggactggtccgagcgcggcaaagggcaatcg
gccgccgacgaagcggcagcgttcaaccagcatttcgccggcctgagcgacggtacggtc
atggcggtcacgccaccgcctatcgaaggcctcggcacttcgggcggcttcgcattgcgc
ttgcaggaccgagccggtctgggtcgcgaagcactgctggcagcacgtaatgaattgctg
ggcaaggccaatggcaacccgaaaatcctctacgccatgatggaaggcctggccgaagcg
ccacaactgcgtctgagtatcgaccgggaaaaagcccgcgcactgggggtgagtttcgag
tcgatcaacaatgccctgtccacggcatttggttcctcggtcatcagtgactttgccaac
gccggtagacagcaacgagtcgtggttcaggccgatcaggactcgcggatgacaccggaa
agcgttctgaaactccatgttcccaacagcagcggcacactggttccgctgggtgcgttc
gtcaccactcactgggaagaaggcccggtgcagatcgcccgctacaacggctacccggcg
ttcaagatttcgggcgatgcaccaccgggtgtcagtaccggcgaggcgatggccgagatc
gagcggattgtttccgagctgccaccgggcattggttacgagtggaccggcctctcctat
caggagaaagtggccagtggtcaggcgacggtgttgttcgcactggcgctggtggtcgtg
ttcctgttgctggttgcgctttatgagagctgggcgattccgctggtggtcatgctgatc
gtgccggtcggagccctgggagccgtgctggctgtaaccgcggtcgacatgcccaacgat
gtgtacttcaaggttggcctgatcacgattatcggtctggcggcgaaaaacgcgattctg
atcgtcgagtttgccaaggaactgtgggaacaggggcattccctgcgcgattcggctctc
caggcagcacgcctgcgcttccgcccgatcgtcatgacctcgctggcctttatcctgggt
gtcgtcccgttgaccatcgccaccggtgctggcgctgccagccagcgtgccatcggtaca
ggcgtgatcggcggcatgctcagcgcgacactgctgggggtgattctggtaccgatcttc
ttcgtatgggtgctgtcggtattgcgtcgcaagccccatccagtcgaacaggagtag
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integrated database retrieval system
