Pseudomonas cichorii: PCH70_21720
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Entry
PCH70_21720 CDS
T03002
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
pci
Pseudomonas cichorii
Pathway
pci02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PCH70_21720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_21720
Transporters [BR:
pci02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PCH70_21720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_22
AAA_16
AAA
AAA_29
AAA_30
AAA_33
DEAD
AAA_5
AAA_21
AAA_23
AAA_25
RsgA_GTPase
ABC_ATPase
Ubiquitin_6
nSTAND1
Mg_chelatase
Zeta_toxin
AAA_15
NB-ARC
Cytidylate_kin
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AHF67325
LinkDB
All DBs
Position
complement(2457200..2458984)
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AA seq
594 aa
AA seq
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MSPQHDTVGTTTTEPLSHTGLLKLAPTLFAIAIGCAVASTLLSLVPLWCIYKIAQMLLNT
APNAEAALGWGLAALFAVLLRWLIMTVSHVTAHLAAFELLRQLRSRIARHLGEVPLSFFN
KNSSTDLRRTINDDVGSLEGFFAHSLPDSIAAAVMPPLTLIVLLCIDWRLALACIAPLPL
AFMAQMLMVKGSAERMAKWQSLQQQISQSFSEYLQGIQVVKSFGLTSLRFGTLSKDIRGA
AEWVAGFARKSSLFWVVFSGLLSANLIIVAPLGAWLLLAGKITLETLLLFLLLAPAVLMP
LLRLTYMLGDQVQRNAALARINAVLLSPAMSENPDARIPDAPLDLRLENVSHAYGERKAL
NQVSFSAQAGQLTALVGPSGSGKSTIAQLVCRLFDADSGSITLGGTDLRDWPLEALLERV
ASVFQQVHLFDGTVLDNLLLARPDADQASVEAATRAACAHDFIQRLPQGYQTRIGEGGAQ
LSGGERQRLSIARALLKNAPVLILDEATAYADSENEALIQEALANLCRGRTVLMIAHRLH
TVIAAQRIVVLDQGQVRGAGRHEELLENCALYRQLWQDHTRIRQWQLSSTGVSA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacaacacgacactgtcggcacgaccacaaccgagcccttgagccataccggg
ctactgaaactggcacccacactgtttgccatcgccatcggttgcgccgtggcctcgacc
ctgctcagcctggtgccgctgtggtgtatctacaagattgcgcagatgctgctcaatacc
gcccccaatgccgaagccgccctgggctgggggctggcagcgctttttgccgttctgctg
cgctggctgatcatgaccgtcagccatgtaaccgcccacctggcggccttcgagctatta
cgccagttgcgcagccgtatcgcccggcatctgggcgaagtccccttgagcttcttcaac
aagaacagcagcacggacctgcgtcgcaccatcaacgacgacgtcggctctcttgaaggc
ttttttgctcactcactccccgactccatagccgccgccgtaatgccgccgctgaccctg
atcgtgctgctttgcatcgactggcgactggcactggcctgtattgccccgctgcccctg
gcctttatggcgcagatgctgatggtcaagggctcggccgaacgcatggccaaatggcaa
agcctgcaacagcagatttcccagagcttcagcgagtacctgcaaggtatccaggtcgtg
aaaagcttcggcctgaccagcctgcgcttcggcacactgagcaaggacattcgcggtgcc
gctgagtgggtggccgggtttgcccgcaagagttcgctgttctgggtggtgttctcgggc
ctgctcagcgccaacctgatcatcgtggcgccgctgggtgcctggctgctgctggcaggc
aagatcaccctggaaacattgctgttgtttctgcttctcgctcccgccgtactgatgcca
ctgctgcgcctgacctacatgctcggcgatcaggtacagcgcaatgcggcactggcccgt
atcaacgcggtgttgctcagcccggcgatgagcgaaaacccggacgcccgcatccccgat
gcgccactggacctgcgtctggaaaacgtctcccacgcctatggcgaaagaaaagccctg
aaccaggtcagcttcagcgcccaggcgggccagttgacagcgctggtcggccccagcggc
tccggcaagagcaccatagcgcaactggtttgccgcctgttcgatgccgacagcggcagt
atcactctgggcggaacggacctgcgtgactggccgctggaagccttgctcgaacgggtc
gcgtcggtattccagcaggttcacctgttcgacggcacagtgctcgacaacctgctgctg
gccaggcccgatgccgatcaggccagcgtcgaggccgcaacccgcgccgcctgcgctcac
gatttcattcagcgtctgccacagggctatcagacccggatcggcgaaggcggcgcgcaa
ctgtccggtggcgaacgccagcggctgtccatcgcacgcgccctgctcaagaacgctccg
gtgctgattcttgatgaagccaccgcctatgccgacagcgaaaacgaagcgctgatccag
gaagcactggccaatctgtgtcgaggccgcacggtgctgatgatcgcccaccgcctgcat
accgtgattgccgcccagcgcatcgtcgtgctggatcaagggcaagtgcgcggcgccggt
cgtcatgaagagctgcttgaaaactgcgcgttgtatcgacagctctggcaagaccacaca
cgtattcgccaatggcaactgagcagtacaggagtatcggcatga
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