Pseudomonas cichorii: PCH70_21820
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Entry
PCH70_21820 CDS
T03002
Name
(GenBank) polyamine ABC transporter, ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pci
Pseudomonas cichorii
Pathway
pci02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCH70_21820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_21820
Transporters [BR:
pci02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PCH70_21820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
RsgA_GTPase
TOBE
MIT_C
AAA_22
DUF2158
Motif
Other DBs
NCBI-ProteinID:
AHF67335
LinkDB
All DBs
Position
complement(2469059..2470213)
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AA seq
384 aa
AA seq
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MSAVIKDSAQHDPKTLVSLCNLNKHYGDFAAVDNIDLDIQDGEFLTFLGSSGSGKSTTLS
MLAGFETPSSGEILVGGKSLVNVPPHKRDIGMVFQRYSLFPHLSVRDNIAFPLAIRKLPA
AERDKRVDAMLKLVQLEQFAHRRPSQLSGGQQQRVAIARALVYEPRILLMDEPLGALDKK
LREDLQDELRQLHRRLGITIVYVTHDQEEAMRLSQRIAIFSHGKIVGLGTGYDLYQNPPN
AFVASFLGNSNFLKLKAQGNAVATFEGNPLSIRLTSGLKTDQDVLLMIRPEKAQALSTQQ
AEATPLEHGWNEVTAKVTEVLFLGESQTCAVVTSGGTAMTVKALSATGLQLKAGDTVRVR
WATADACIYTQWAESDLNKAAGAH
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgatcaaagacagcgcacaacacgacccgaaaaccctggtcagcctgtgc
aacctgaacaagcattacggcgatttcgctgcagtggacaatatcgacctggatatccag
gacggcgagttcctgaccttcctgggctccagcggctcgggcaagagcaccacactgtcg
atgctggcagggtttgaaacacccagctcgggagaaatcctggtaggtggcaaatccctg
gtgaacgtgccgccccacaagcgggatatcggcatggtgttccagcgctattcgctgttt
ccgcacctgtcggtacgcgacaacatcgccttcccgctggccatccgcaaactgccggcg
gccgagcgcgacaagcgtgtggacgccatgctcaagctggtgcaactggaacaattcgcc
catcgccgcccttcgcaactgtccggcggccagcagcaacgtgtggccattgcccgggcg
ctggtttacgaaccacgcattctgctgatggacgaacctctgggcgctctggacaagaaa
ctgcgtgaagacctgcaggatgaactgcggcaactgcatcgtcgcctgggcatcaccatt
gtctacgtgacccacgaccaggaagaagccatgcgcctgtctcagcgcatcgcgatcttc
agccatggcaagatcgtcggcctgggcaccggctatgacctttatcagaacccgcccaat
gcctttgtcgcctcgttcctgggcaactcgaacttcctgaagctcaaggcacagggcaat
gcggtggcgacgtttgaaggcaatcccctgtcgatccgtctgacttcaggcctgaaaacc
gatcaggacgtgttgctgatgatacgtccggagaaagctcaggccctgagcactcaacag
gccgaagccaccccactggagcatggctggaacgaagtcacggcaaaggtgacggaagtc
ttgttcctgggcgaaagccagacctgtgcggtcgtcacttcaggcggtaccgccatgacc
gtcaaggcgctttcagccaccggcttgcaactgaaagccggtgataccgtccgcgtccgc
tgggccacagccgatgcctgtatctacacccaatgggcagaaagcgacctgaacaaggcg
gctggggctcattga
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