Pseudomonas cichorii: PCH70_22030
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Entry
PCH70_22030 CDS
T03002
Name
(GenBank) transcriptional regulator, LysR family protein
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pci03000
]
PCH70_22030
Transcription factors [BR:
pci03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PCH70_22030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHF67356
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Position
complement(2486900..2487796)
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AA seq
298 aa
AA seq
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MLNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLFEETLGVDLFRRVGRQLELTE
AGRLALPYAEQMFQLGNELETMLRSQPDEQQLLFRIGVADVVPKSIVYRLIAPTMELDES
IRITCREDKLERLLADLAIQRLDMVISDSPMPPHLDIKGYNQKLGECGVSFFATQGVAES
LWGDFPQCMHGAPLLIPGQDTVVRGRLMRWFAEQKIQPRIIGEFDDSALMKAFGKSGSGV
FVAPSVIADEVQSQYDVKIIGQTESVTESFYAITVERKVRHPGIVAITESARNKLFTD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattatcgtcaactccactatttctgggtcgtggccaaaaccggcagcattgta
cgcgcctgcgaacaattgaacctcaccccccagaccatcagcggccagatcagcctgttc
gaggaaaccctgggcgtcgatctcttccgccgtgtaggccggcaactggagctgactgaa
gccggtcgcctggcactgccctatgccgaacagatgttccagttgggcaatgagctggaa
accatgctgcgctcacagcccgacgaacaacagctcctgtttcgcatcggtgtggccgat
gtcgtgcccaaatccatcgtctatcgactgatcgcgcccaccatggagctcgatgaatcg
atccgtatcacctgccgcgaagacaagctcgaacgcctgctggccgacctggcaatccag
agactggacatggtgatatctgacagccctatgccaccacatttggacattaaaggctac
aaccagaaactgggagagtgtggcgtcagcttcttcgcgacccagggcgtggctgaaagt
ctgtggggtgactttccgcagtgcatgcatggagcaccactattgattcccgggcaggac
accgtggttcgtggcaggttgatgcgctggttcgccgaacagaaaatccagccgcggatt
atcggggagttcgatgacagcgccctgatgaaagcttttggcaaatccggcagcggcgta
ttcgtcgcgcccagcgtgatcgccgatgaagtacagagccaatatgacgtgaaaatcatc
ggccagaccgaatcggtgaccgaatcgttctatgccattaccgtcgaacgaaaggtcagg
caccccggtattgtcgccattaccgagagtgcccgaaacaagctgtttaccgactga
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