KEGG   Pseudomonas cichorii: PCH70_24020
Entry
PCH70_24020       CDS       T03002                                 
Name
(GenBank) type VI secretion protein, VC_A0110 family
  KO
K11896  type VI secretion system protein ImpG
Organism
pci  Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:pci00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pci02044]
    PCH70_24020
Secretion system [BR:pci02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PCH70_24020
SSDB
Motif
Pfam: T6SS_TssF EF-hand_5
Other DBs
NCBI-ProteinID: AHF67555
LinkDB
Position
2722169..2723956
AA seq 595 aa
MSFNNYYQSELTALRQLGSRFAERNPALAPFLGQAGQDPDVERLLEGFAFLTGRLRQKLD
DELPELTHSLMQLLWPNYMRPFPAVSMLQFEPLEHSGAGIVVARGTPVESIPVEDTVCHF
RTCYETAVLPLRLSAVNYSANGNGVLLGLRLDMNGDGHIGSLELNDLRLHFAGEPYVSQT
LYLGLMRNLEKISLTPLDAEGNPFAVAGDETVSFNIPVDRIKAVGFAEEEALVPYPLNTF
RGYRYLQEYFVFKEKYLFVDVSGLEVINSLAPQILEKSRSIELSFDIAKNEIQRLRPTLQ
NIKLYCTPIVNLFEQDALPVRLEGTQDEYRLLPGGHDSKKCGIFSVDKVTGWQPGGLGYQ
EFVLFESFEHDPSFDVQHPRPYYSIRQHPSPLHEGLDTYLSFDGRQTRQHETLSVELTCT
HQDLPLQIAAGGICRPCEETPDFLKFRNITPATRSFAPPLHKEFLWRVISNMSLNYLSLN
NVSALKCILETYDFPRYYDQQAERVSKQLLNGLKSIRHEPVDHLYRGLPVRGLKTELLID
TQGCAGEGGLFVFASVLNEFFALYASLNSFHELHVRSTQGEVYEWTPRMGLQPLI
NT seq 1788 nt   +upstreamnt  +downstreamnt
ttgtcttttaataactattatcaaagtgaattgacggccttgcgtcaattgggaagtcgc
tttgccgagcgtaatcctgcattggcgccttttttggggcaggccgggcaggatcctgat
gtcgagcgactactggagggtttcgcatttctgacaggccggctgcgacagaagctggat
gacgagttacccgaacttactcactccttgatgcagttgttgtggccgaattacatgcgt
ccgtttcccgcggtcagcatgttgcagttcgagcctctggagcattcgggagcggggatt
gtagttgcccgaggaactcccgtggaaagcattccggttgaggacaccgtttgtcatttt
cgtacctgctacgaaacggctgtattaccgttgaggctgagtgcagtcaattactccgca
aatggcaacggtgtattgcttggcttgcgtcttgatatgaacggtgacgggcatatcggt
tctctggagctgaatgatttgcgactgcattttgccggagagccttatgtcagccagacg
ttatacctggggttgatgcgcaatctcgaaaaaatcagtttgacgcccctggatgcggaa
ggtaatccttttgctgttgcaggcgacgaaacagtatctttcaatatacctgtcgacaga
ataaaagcagtgggttttgcagaagaggaagcccttgttccttatccattgaatactttt
cgagggtatcgttatctgcaggaatactttgtatttaaagagaaatacctgtttgttgat
gtgtcggggcttgaggtcatcaattcactggcgccgcagattctggaaaaatcaaggagt
atagagctatcgtttgatatcgcgaaaaatgaaattcagcgcctgcgaccgacactgcag
aatatcaaactgtattgcacgcctatcgtgaacctgttcgaacaggatgcactgcctgtt
cgtcttgagggtacgcaggatgaataccggttgctgcctggcggacatgactcaaaaaag
tgcgggatcttttcggtcgacaaggtgaccggctggcagccgggaggtctgggttatcag
gagtttgtgctgtttgagtcattcgagcacgaccccagtttcgacgtgcaacatccaagg
ccttattacagcattcgtcagcatccttcaccgctgcacgaggggctggacacgtatttg
agtttcgatggtcgtcagacccgtcagcatgaaaccctctctgtggagttgacctgtacc
catcaggaccttcccttgcagatagcggcaggtggcatttgcaggccttgcgaagaaaca
cctgattttctgaagttcagaaatattacaccggctacgcgaagttttgctccgccgcta
cacaaggagtttctgtggcgggtgatcagtaacatgtccttgaattacctatcgttgaat
aacgtctcggcgttgaagtgcattctggaaacgtatgactttccgcgttattacgaccag
caggctgaacgggtcagcaagcagcttttgaacggactcaagtccattcggcatgaacct
gtcgatcatttatatcgaggtctccctgttcgagggttgaaaacggagttgctgatcgat
acgcaaggctgtgccggtgaaggagggttgtttgttttcgcttcggtacttaacgagttt
ttcgctctttacgccagtctcaactctttccatgaattgcatgtcaggagcacccaggga
gaagtatacgaatggacaccacgcatgggacttcaacctctgatctga

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