Pseudomonas cichorii: PCH70_25790
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Entry
PCH70_25790 CDS
T03002
Name
(GenBank) type VI secretion protein, VC_A0107 family
KO
K11901
type VI secretion system protein ImpB
Organism
pci
Pseudomonas cichorii
Pathway
pci02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PCH70_25790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pci02044
]
PCH70_25790
Secretion system [BR:
pci02044
]
Type VI secretion system
Imp/Vas secretion system core components
PCH70_25790
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VipA
DUF6049
Motif
Other DBs
NCBI-ProteinID:
AHF67732
LinkDB
All DBs
Position
complement(3011664..3012167)
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AA seq
167 aa
AA seq
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MAKEGSVAPKERINVTFKPATGGAQEEIELPLKLLAIGDYTHRKDERKIEDRKPISIDKM
TFDEVLAKQELSLTLSVPNRLQEESDNEELAVQLRVNSMKDFNPASLVEQVPELKKLMEL
RDALVALKGPLGNAPAFRKAIEGVLADDESRGRVLGELGLNAEAPKA
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaggctcggtagcccccaaggaacgcatcaacgtcactttcaaacctgcc
accggtggtgcacaggaagagatcgaactgccgttgaagctgcttgcaatcggtgattac
acgcaccgcaaggacgaacgcaagatcgaagatcgcaagccgatcagcatcgacaaaatg
acgtttgacgaagtgctggcaaagcaagagctgagtctgacattgagcgtgccgaatcgc
cttcaggaagaaagcgacaatgaagagctggccgtgcagctgcgcgtcaactcgatgaag
gacttcaacccggccagcctggtcgagcaagtgccagagttgaagaaactgatggaactg
cgcgacgcgttggtggccctcaaaggtccgctgggtaacgcgcctgcgttccgcaaagcc
atcgaaggcgttctcgccgacgacgaatcccgcggtcgcgtactcggtgagctgggtctg
aacgccgaagccccgaaagcctga
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