Pseudomonas cichorii: PCH70_26080
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Entry
PCH70_26080 CDS
T03002
Name
(GenBank) syringafactin efflux protein SyfD
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
pci
Pseudomonas cichorii
Pathway
pci02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PCH70_26080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_26080
Transporters [BR:
pci02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
PCH70_26080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
AAA_21
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_23
DUF4396
MMR_HSR1
AAA_22
nSTAND1
TadZ_N
AAA_28
AAA_25
Ploopntkinase3
AAA_18
IIGP
DUF4064
Motif
Other DBs
NCBI-ProteinID:
AHF67761
LinkDB
All DBs
Position
complement(3068874..3070880)
Genome browser
AA seq
668 aa
AA seq
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MNQKVEVAALHETTIDTGSPILHLQGVSRSFMAGDREFLALKHIDLAIHAGELVAIIGAS
GSGKSTLMNILGCLDHASGGSYKVNGQETRDLDDEELAALRRDHFGFIFQRYHLLPHLDA
VRNVEIPAVYAGKSQAQRHQRASELLTRLGLSGHLSHRPSQMSGGQQQRVSIARALMNGG
QVILADEPTGALDTASGKEVMNILLELHGLGHTVILVTHDPKVAAHAERIIEVSDGEIIS
DQRTVQKAQAAPEPEPQLQHEGAARRLGVSLGLFREAFNMAWIALISHRMRTLLTMLGII
IGITSVVSISAIGEGAKRYVLKDIQAIGSNTIDIYAGSNFGDSRAKSIETLLPSDVAALN
RMYYIDSATPVVGRSMLVRYRNIDVDAQLNGVSNRYFQVRNIQLAAGITFNEQDARRQAQ
VVVLDHNTAQRLFGPGVNPLGKVILIGNLPCTVIGVTSDHKNLFIAGNTLNIWMPYETAA
GRVLGQRHLDSISVRVKDGMPSKQVEEEIKALMLQRHGTKDFFTNNLDSVMQTVQKTSRS
LTLLLSLIAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARQSDIRQQFLVEAVMVC
LIGGVIGIALSYGIGYLFTLFVKQWEMVFSPASIVTAFACSTLIGVLFGFVPARNAARLD
PIEALARD
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaaggtagaggttgcagctctccacgagacgacgatcgatacaggcagcccg
atcctgcacctgcaaggtgtcagccgcagtttcatggccggagaccgcgagtttctggca
ctcaagcacatcgatctggcgattcatgcaggcgagctggtggcgatcatcggtgcctcg
ggctcgggcaagtcgacgctgatgaatatccttgggtgtctggaccatgccagcggcggc
agctacaaggtcaacggccaggaaacccgtgacctcgatgatgaggaactggcggcgctg
cgtcgtgaccatttcggtttcattttccagcgctatcacttgctgccgcacctggatgcc
gtgcgcaacgtcgagatcccggctgtgtatgccggcaaatcccaggcgcagcggcatcag
cgtgcgtcagagttgctgacgcgcctggggctcagtgggcacctgtcgcacaggccgagc
cagatgtccggtgggcagcagcaacgggtgagtattgcccgcgccttgatgaacggcggt
caggtaattctggccgacgaacccaccggcgccctggataccgccagcggcaaggaggtg
atgaacatccttcttgagctgcatggcctcggccatacagtgattctggtcacccacgac
cccaaggtcgcggcccacgccgagcgcatcatcgaagtcagtgacggcgagatcatcagt
gaccagcgaacggtgcagaaggcacaggctgcgcccgaacccgagcctcagttgcagcat
gagggcgcggcccggcgcctgggtgtcagcctcggtctgtttcgcgaagctttcaacatg
gcctggatcgccctgatttcgcaccgcatgcgcaccttgctgaccatgctcgggatcatc
atcggtatcacttcggtcgtgtccatctcggccattggcgaaggtgccaagcgctacgtg
ctcaaggacatccaggccatcggcagcaacaccatcgatatctacgcgggcagcaacttc
ggtgacagccgggccaagtccatcgaaaccctgttaccgtccgacgtcgcggcgctcaat
cggatgtattacatcgacagcgctacgccggtggtcggtcgaagcatgctggtgcgctac
cgcaacattgacgtcgatgcccagctcaacggcgtcagcaaccggtacttccaggtgcgc
aacatccagttggcggcaggcatcaccttcaacgagcaggatgcacggcgtcaggcccag
gtggtggtgctcgatcacaacaccgctcagcggctgttcgggccgggtgtaaatccgttg
gggaaggtgatcctgatcggcaatctgccgtgcacggtgattggcgttaccagcgatcac
aagaacctgttcatcgccggcaataccctcaatatctggatgccttacgagacggcagcc
ggtcgcgtgctgggccagcgccatctggacagcatcagtgtgcgggtcaaggacggcatg
ccgagcaagcaggtggaggaagagatcaaggccctcatgctgcagcgccatggcaccaag
gacttcttcaccaataacctcgacagcgtcatgcagaccgtgcagaaaaccagtcgctcg
ctgaccttgctgttgtcgctgattgcggtgatttccctggtggtcggtggtataggggtg
atgaacatcatgctggtgtcggtgaccgagcggacccgcgagatcggtatccgcatggcc
gtcggtgctcgccagtctgatatccgccagcagtttctggtggaggccgtgatggtatgc
ctgatcggcggggttatcggtatcgccctgtcttacgggatcggctacctgttcacgctg
ttcgtcaaacagtgggaaatggtgttctcaccggcttcgatcgtcaccgccttcgcctgt
tcgacactgattggcgtgctgttcggctttgtaccggcacgcaatgcggcaaggcttgat
ccgatcgaagcgttggcacgggattga
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