Pseudomonas cichorii: PCH70_27210
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Entry
PCH70_27210 CDS
T03002
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pci
Pseudomonas cichorii
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pci03032
]
PCH70_27210
03400 DNA repair and recombination proteins [BR:
pci03400
]
PCH70_27210
Enzymes [BR:
pci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PCH70_27210
DNA replication proteins [BR:
pci03032
]
Prokaryotic type
DNA Topoisomerases
PCH70_27210
DNA repair and recombination proteins [BR:
pci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PCH70_27210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4439
Motif
Other DBs
NCBI-ProteinID:
AHF67874
LinkDB
All DBs
Position
3259742..3260797
Genome browser
AA seq
351 aa
AA seq
DB search
MPSPTASSSAVPGLHYVDDSQPGFTRKILRGKFAYFDTDGQRIRDEAEIQRINALVIPPA
YTDVWICADPAGHLQATGRDARGRKQYRYHPQWREIRDQDKYSRLIEFGHALPKVRKQIE
AQLAQPGIGREKVMATVISLLDATLIRIGNSRYAKENRSYGLTTLRNKHVEVHGTQIVFE
FRGKSGIEHRVSVRDRRLANVIKRCMELPGQNLFQYLDDNGERHTVTSSDINAYLQDLTG
ADFTAKDYRTWAASALALATLRKLHWEPEADAKKHIVEMVKAVSRQLGNTPAICRKCYIH
PAVLEGFLLGELAKLPRSRQRKGLHLEEVALAHYLHSLAQSMEDVATTKKS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgccctctccgaccgccagttcatcagcagtgcctggacttcattacgtcgacgattct
cagccagggttcacccgcaagatcctgcgaggcaagttcgcctacttcgataccgatggt
cagcgcattcgcgacgaggcagaaatacagcgcatcaacgcactggtcattccccccgcc
tacaccgacgtctggatctgcgccgacccggccggacatctgcaagccactggccgcgac
gccagaggccgcaaacaatatcgctaccatccgcaatggcgggaaatccgggatcaggac
aaatactcgcgcctgatcgaattcggccatgcactgcccaaggtccgcaaacagatcgaa
gcacaactggcacaacccggcatcggtcgcgaaaaagtcatggcaacggtcatttccctg
ctggacgccaccttgatccgcatcggcaacagtcgctacgccaaggaaaaccgctcgtac
ggcctgaccaccctgcgcaacaaacacgtagaagtgcacggcacgcaaatcgtcttcgag
tttcggggtaaaagcggcatagaacatcgcgtcagtgtgcgggatagacgactggccaat
gtgatcaagcgctgcatggaattaccggggcaaaacctctttcagtatctggacgataac
ggcgaacgccacaccgtcacctcttcggatatcaatgcctacctgcaagacctgaccgga
gccgacttcaccgccaaggactatcgcacctgggccgccagcgcgctggccctggcaacc
ctgcgcaaactgcattgggagccggaagccgatgccaagaaacacatcgttgaaatggtc
aaggccgtctcacgacaactgggcaacacccccgccatctgccgcaaatgctacatccac
cccgccgtgctggagggtttcctgctgggcgaactggcgaagctgccccgcagccgacaa
cgcaaaggcctgcacctggaagaggtcgccctggcccattacctacacagcctggcgcaa
agcatggaagacgtcgcgaccacgaagaaatcgtga
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